| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2053 |
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| Symbol | |
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| ID | 3705029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2361833 |
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| End bp | 2363671 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637738528 |
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| Product | glycoside hydrolase 15-like protein |
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| Protein accession | YP_344043 |
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| Protein GI | 77165518 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.440439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAC ACAATTACCC TGCCATTAGT GATTATGGCT ATATTTCCGA TTGCCATTCC
TCCGCCCTGA TCTCGAAATC CGGTTCCATC GACTGGTGCT GCATGCCACG GGTGGATTCC
CGCAGCTGTT TTGGCCGTCT TCTGGGCTGG GAGCAAGGCG GGTACTGTCA AATCGCTCCG
CCAGAACCCC ATGAAGTATC CCGCCGTTAC CTCCCTCAGA CGCTGATTCT GGAAACCACC
TTTCGAACGA GCGAGGGAGA AGCCCGTCTC CTGGATTGTT TTACGCTGCG GGAAGGGGGG
AAACAGCACC CTCACCGGCA GATCCTCAGG GTACTTGAAG GGCTAAAAGG GCAGGTGAGC
TTCCGCGTCG ATATTGCGCC ACGCTTCGAT TACGGCGCTA TCAAACCTTG GATTCAGCGG
CGCCATAATA ATCATTCTGG CGATTATTAT ATTGTGATAG GAGGCAGTGA TGGGTTACTC
ATCTCCAACG ATTTTCGCCT GGAAATGAAG GATCGCCATA ATCTTCAAGG CGCTTGCCAT
ATTAAAGAAG GGCAACGAGT TCATCTCTCC CTTTTATACC GGCGCCCGGA AAGTCTTGAT
GAAGGCTGGG CTAATATCCC TACTATCGAA ACGCTGGACC AGCGCTTGGA AGAAACTATC
AAATGGTGGC ATGCCTGGTT CTCCCAGGGC GAATTTAACG GCCCCCATGC TGAACAAGCG
CAGCGTTCGG CCCTTGTCCT CAAGGGCTTA TGCAATGCGC CTACGGGGGC TATCGCGGCG
GCCTCCACAA CATCTCTTCC GGAAGCGCCC GGCGGGGAGC GGAACTGGGA TTATCGTTTT
ACTTGGATTC GGGACTCTAC CTTTACGGTC AGATCACTGG CGGATCTTGG ATATATCAAG
GAGGCAGATG GTTTTCGCCG TTTTATCGAG CGGACTGCAG CTGGATGTGC GGACGAAGTC
CAGATTTTAT TTGGTGTGGG GGGAGAACGG CGACTGCATG AATTTGAGAT TAAAGAATTG
CCAGGATACC GGGGAGCAAA GCCAGTGCGC CAAGGCAATG CGGCGGAAAA ACAAATCCAA
CTAGATGTTT ATGGAGAATT ATTGGAGTTA GCCTGGCGCT GGCGCCAGCG GGGGCAAACC
CCAGACGAAG ATTATTGGGA ATTCCTAGCG GGCCTTGTGA ATGCAGCGGG TGAGCGTTGG
AAAGAGCCAG ATCAAGGTCT TTGGGAGATG CGCGGTGAAC CCCGTCATTT CGTCCACTCC
AAGGTCATGT GTTGGGCGGC CTTAGATCGA GGGATCAAAC TGGCTGCAGA CCTTGATAAT
CATGCGCCTC TTGAGTGGTG GAAGCAGGAA CGGAAAGCGG TCCGCCAAGC AGTGGAAGAG
AAGGGCTATG ATTTCCAGCG CGGTATTTTT ATTCAGGCCT TTGATCATGT TGAGATGGAC
GCGGGTTTAT TGTTATTGCC CGTGGTGGGA TTCGTGGATT ATCAGGACGA ACGCATGATA
CGGACCACAA ACGCCGTATG GCGGGACTTG GAACAAGAAG GTCTGCTGCG CCGCTATAGA
GCGGAAAGTC ACGATGATGG CCTGCAGGGC AAGGAAGGCG TGTTTCTGGC TTGCTCCTTT
TGGCTGGCGG AATGCCTGGC TTACCAAGGC CGCCTGGAAG AGGCGCGCGA GGTGTTCACG
CAGGCAGCGG CTACCGGCAA TGATCTTGGC CTTTATTCAG AGGAATACGA TACCGAAAAA
AAGGAGATGT TGGGCAACTT TCCCCAAGGT TTGACTCACC TTTCCCTGAT TGCCGCCGCG
GTAGCCCTGT CAAAGGTGGC AGAAGTGGGA GGGAACTAA
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| Protein sequence | MDKHNYPAIS DYGYISDCHS SALISKSGSI DWCCMPRVDS RSCFGRLLGW EQGGYCQIAP
PEPHEVSRRY LPQTLILETT FRTSEGEARL LDCFTLREGG KQHPHRQILR VLEGLKGQVS
FRVDIAPRFD YGAIKPWIQR RHNNHSGDYY IVIGGSDGLL ISNDFRLEMK DRHNLQGACH
IKEGQRVHLS LLYRRPESLD EGWANIPTIE TLDQRLEETI KWWHAWFSQG EFNGPHAEQA
QRSALVLKGL CNAPTGAIAA ASTTSLPEAP GGERNWDYRF TWIRDSTFTV RSLADLGYIK
EADGFRRFIE RTAAGCADEV QILFGVGGER RLHEFEIKEL PGYRGAKPVR QGNAAEKQIQ
LDVYGELLEL AWRWRQRGQT PDEDYWEFLA GLVNAAGERW KEPDQGLWEM RGEPRHFVHS
KVMCWAALDR GIKLAADLDN HAPLEWWKQE RKAVRQAVEE KGYDFQRGIF IQAFDHVEMD
AGLLLLPVVG FVDYQDERMI RTTNAVWRDL EQEGLLRRYR AESHDDGLQG KEGVFLACSF
WLAECLAYQG RLEEAREVFT QAAATGNDLG LYSEEYDTEK KEMLGNFPQG LTHLSLIAAA
VALSKVAEVG GN
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