Gene Noc_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2032 
Symbol 
ID3705183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2344402 
End bp2345358 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content53% 
IMG OID637738507 
Productglycerate dehydrogenase 
Protein accessionYP_344022 
Protein GI77165497 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGGCG TATTCCTTGA TCAAGATACG CTCCATCCGG CCGACCTTGA CTTTTCGCCC 
CTGGAAGCGA TTATCTCGCA GTGGAAATAC TATGAGACCA GTTCCACTGC AAGCGAAATC
ATCGATCGTA TCCGGCAAGC TACCATTGCT GTTACTAACA AAATTGCCCT GACCGGTTCA
ATATTAAAGC AAGCTCCTCA TTTACAACTA GTCTGCATCG CAGCAACGGG AACCAACAAT
GTGGACTTGG AGGCGGCCCG CCGCCTAGGG ATTGCAGTCT GCAATGTCCG AGGCTACTGT
ACTGCCTCTG TAGTGGAACA TGTTTTCGCA TTAATTTTAG CGCTTACCCG GCGTCTTGCC
GCCACTAGCC ACGCAGCCAC CACTGGCGCC TGGCAGTACA GTCCTCATTT TACGGTACCG
GACTTTCCTT GCCGGGAACT TGCAGGAAAA ACCTTCGGGA TTGTGGGTTA TGGTGAGCTG
GGCCAGGCAG TCGCTCGGAT CGCCAAGGCA TTTGGGATGA CTGTACTTAT AGCACAACGA
TCGAATACTC CTAATAGGCC AGGTCGTATC CCTCTCAAAG ACCTGCTTCC CCTGGTGGAT
ATCCTCAGCC TCCATTGCCC CCTTACTCCG GAAACCACCG GTTTAATCGG CCCAAACGAA
TTGGCTTCAA TGCGCTCCGA TGCGCTGCTC ATTAACGCTG CTCGGGGCGG GATCGTAAAT
GAGCAGGCGC TCGCTGATGC CCTGCGTAGG GGACACCTTG GAGGCGCGGG AGTAGATGTA
TTGAGCCAAG AGCCTCCCCG GCACGGCAAC CCTTTATTAG CACCGGATAT TCCCAATCTT
ATTCTCACTC CTCATGTGGC TTGGAACAGC CGTGAGGCGC GTCAGTACCT TCTCACCCAA
GTTGCCAAAA ATATCCGTAG TTTTCTCGCT GGAGAACCCC GTAATTTAGT CAGCTAA
 
Protein sequence
MQGVFLDQDT LHPADLDFSP LEAIISQWKY YETSSTASEI IDRIRQATIA VTNKIALTGS 
ILKQAPHLQL VCIAATGTNN VDLEAARRLG IAVCNVRGYC TASVVEHVFA LILALTRRLA
ATSHAATTGA WQYSPHFTVP DFPCRELAGK TFGIVGYGEL GQAVARIAKA FGMTVLIAQR
SNTPNRPGRI PLKDLLPLVD ILSLHCPLTP ETTGLIGPNE LASMRSDALL INAARGGIVN
EQALADALRR GHLGGAGVDV LSQEPPRHGN PLLAPDIPNL ILTPHVAWNS REARQYLLTQ
VAKNIRSFLA GEPRNLVS