Gene Noc_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2028 
Symbol 
ID3705179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2340148 
End bp2341125 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content51% 
IMG OID637738504 
Producthypothetical protein 
Protein accessionYP_344019 
Protein GI77165494 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTG TCCTCTCTAG CCAGAAGCGG GGTGAACCTG CTTTCCATGA CTATCGGCCG 
GCGCAAGCGC GGTTTCGGGA AGATGTTCTC TCTGGATTAA CTAAAAGCCA GCGCCGGATT
CCCCCTAAGT ACTTTTACGA TGAAAAGGGC TCCCGCCTCT TTGATGCTAT CTGCCAATTG
CCTGAGTATT ATCCTACTCG CACTGAAATT CAGTTACTTA AGCACTATGG GGCGGAAATG
GCGGAATATA TAGGCGAGGG CAGTGTGCTG GTAGAGTTTG GCAGCGGGAG TAGTCTCAAG
ATCCGCGTTC TTCTCGATGC CTTGGAGCCA GCAGCCTATT TACCCATTGA TATTTCCCGT
GAGCATCTAT TCCATGCCGC TAAGCGGCTG GCCGGGGATT ATCCCGGGGT GGCTATCCAC
GCCGTCTGCG CAGATTATAG CCAGCCCTTG GGATTGCCCG GGGGGTTCGC CGAAAAGCCT
AAAGCAGGAT TTTTTCCAGG CTCAAGTATT GGTAACTTCG AGCCTGAAGA AGCCCGCCAA
TTTCTGACGC GGATAGCAGC TTTGCTAGGG CCGGGGAGCG GCTTGCTTAT CGGCGTGGAT
TTAAAGAAAG AGGCCGCCCT GCTCAATGCC GCCTATAACG ATAACCAGGG TATTACGGCG
GCTTTTAATC TAAACCTGTT GCAGCGCATT AACCGGGAAC TGGAAGGGAA TTTCGATCTG
ACCGGCTTTG AGCATCATGC CCTTTATAAT TCTGCTGAGG GGCGAGTGGA AATGCACTTG
GTCAGCCTTA AAGACCAGGC GGTGACGGTA AACAATCAAA CCTTCCAATT CCAGGCTGGG
GAAACGCTTC ATACGGAAAA TTCCTATAAA TACAGTATTG AAGAATTCCA ACAACTGGCG
AGTTCAGCAG GGTTCCAACC ACAGCAAGTT TGGACTGATC GGGAGGATTT GTTCAGTGTC
CATTACCTGA GTCTTTAA
 
Protein sequence
MNSVLSSQKR GEPAFHDYRP AQARFREDVL SGLTKSQRRI PPKYFYDEKG SRLFDAICQL 
PEYYPTRTEI QLLKHYGAEM AEYIGEGSVL VEFGSGSSLK IRVLLDALEP AAYLPIDISR
EHLFHAAKRL AGDYPGVAIH AVCADYSQPL GLPGGFAEKP KAGFFPGSSI GNFEPEEARQ
FLTRIAALLG PGSGLLIGVD LKKEAALLNA AYNDNQGITA AFNLNLLQRI NRELEGNFDL
TGFEHHALYN SAEGRVEMHL VSLKDQAVTV NNQTFQFQAG ETLHTENSYK YSIEEFQQLA
SSAGFQPQQV WTDREDLFSV HYLSL