Gene Noc_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2023 
Symbol 
ID3705174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2335103 
End bp2336209 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content56% 
IMG OID637738499 
ProductGTP cyclohydrolase II 
Protein accessionYP_344014 
Protein GI77165489 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTGA GCAAGACGGA AGCGATCATT CAGGATCTCC GTGAAGGAAA AATGGTTATC 
CTCATGGACG ATGAGGATCG GGAGAATGAG GGAGACTTGA TTATGGCAGC CTCCCAGGTG 
AGGGCGCCAG ATATCAATTT TATGGCCCGC TATGGACGGG GATTGATTTG TCTGACCTTG 
ACTGAGGCCC GTTGCCGCCA ATTACGGCTG CCCTTAATGG TGTCAGACAG TAACGCTAAA 
TATAGTACTA ATTTTACGGT ATCCATCGAA GCGGCAACGG GGGTGACTAC GGGAATTTCC 
GCAGCGGATC GGGCTCGCAC CGTGCAAGCG GCGGTTGCTC CAGAGGCGCG CCCCGAGGAT 
TTGGAGCAGC CGGGCCATAT TTTCCCCCTC ATGGCTCGTC CAGGGGGAGT GCTTACCCGA 
GCAGGGCATA CGGAGGCAGG TTGTGACTTG GCGCGGCTGG CTGGTTTTGA GCCGGCGGCA 
GTCATTGTGG AAATTCTCAA TGAAGATGGA AGTATGGCCC GCCGCCCGGA TCTGGAAGTT 
TTTGCCGAGC GCCACGGTTT GAAACTGGGC ACCATCGCCG ATCTGATTCG TTACCGTTTA 
GAACATGAAC GCTCTGTCGC ACGGGTAGCC GAGTGCGCTC TGCCTACGGA ACAGGGGCTG 
TTCCGCCTCT TAGCTTATCA GGATCTGGTG GACCAGCAGC TCCATCTGGC TTTAGTTAGG 
GGCGAGCTTT GTCCTGAAGA GCCGGCTTTG GTGCGTGTTC ACATGGCTGA TACCCTTTGC 
GATATTCTCC AGGTACGGCG CGGTGATTGT GGCTGGCCCT TGCACGATGC CATGACTCGC 
ATCGCCAAGG CGGGTACCGG CGTGGTCGTG ATTCTACGCC GGCCGGAATC TTCTAGTGAT 
TTGGTGCAGC GAATTCAGGA CTATAATCTG GAGGATCAGG GGGAGCGTTT GCCTCGGCAA 
GAGCCTCCAA ATGATTTGCG GACTTATGGA GTTGGAGCCC AGATCTTGAC TGATTTGGGT 
GTGCAAAAGA TGCGGGTGAT GAGCGCTCCC CGGCGAATGC ATGGGCTGGC GGGTTTTGGC 
CTGGAAGTGG TGGATTATGT TACTTGA
 
Protein sequence
MPLSKTEAII QDLREGKMVI LMDDEDRENE GDLIMAASQV RAPDINFMAR YGRGLICLTL 
TEARCRQLRL PLMVSDSNAK YSTNFTVSIE AATGVTTGIS AADRARTVQA AVAPEARPED 
LEQPGHIFPL MARPGGVLTR AGHTEAGCDL ARLAGFEPAA VIVEILNEDG SMARRPDLEV 
FAERHGLKLG TIADLIRYRL EHERSVARVA ECALPTEQGL FRLLAYQDLV DQQLHLALVR 
GELCPEEPAL VRVHMADTLC DILQVRRGDC GWPLHDAMTR IAKAGTGVVV ILRRPESSSD 
LVQRIQDYNL EDQGERLPRQ EPPNDLRTYG VGAQILTDLG VQKMRVMSAP RRMHGLAGFG 
LEVVDYVT