Gene Noc_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2022 
Symbol 
ID3705173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2334508 
End bp2335113 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content56% 
IMG OID637738498 
Productribonuclease H 
Protein accessionYP_344013 
Protein GI77165488 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTTG ATGGCGGGAT ATTGAGTACA TCAGTTCTGG GACAAAGAGT TGCGGGGGTG 
GATGAAGTAG GCCGCGGTCC CTTAGCTGGC CCGGTTATCG CCGGGGCGGT GATTCTTGAT 
CCGGAATGTC CGATTAGCGG GGTAAAGGAC TCCAAACAGT TGACGGCACC CGCGCGGGAA 
CGTTTGGCTG CGCTCATCCA AGCGCAGGCA GTCGCTTGGG CCTTAGGTCG GGCTGAAGCT 
GCGGAGATCG ATCAGTTTAA TATCTTGCAG GCCAGCTTGT TAGCAATGGA GCGAGCTATT 
TCGGCACTTT CAGTGGTTCC CGACCTGGTT TTGGTAGATG GCAAGCATTG TCCCCCCACC 
GTGTGTCCCG TACGGGCCAT CGTCAAGGGG GACCAACAGA TTATGGCTAT CGGGGCTGCT 
TCTATTGTGG CCAAGGTAGC CCGGGATGCC GAGATGATCG CTTTTGAGGA AAGCTATCCA 
GGCTACGGTT TTGGAATTCA TAAAGGTTAT CCGACCCGGG CTCATCTGGC TGCTCTGAAA 
GCACTGGGCC CCTGCTCCAT TCACCGGCGC TCTTTTCGGC CGGTGAGACG CTTCTTGGAA 
GCATAG
 
Protein sequence
MLLDGGILST SVLGQRVAGV DEVGRGPLAG PVIAGAVILD PECPISGVKD SKQLTAPARE 
RLAALIQAQA VAWALGRAEA AEIDQFNILQ ASLLAMERAI SALSVVPDLV LVDGKHCPPT 
VCPVRAIVKG DQQIMAIGAA SIVAKVARDA EMIAFEESYP GYGFGIHKGY PTRAHLAALK 
ALGPCSIHRR SFRPVRRFLE A