| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2021 |
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| Symbol | |
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| ID | 3705172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2332023 |
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| End bp | 2334458 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738497 |
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| Product | PAS sensor diguanylate cyclase/phophodiesterase |
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| Protein accession | YP_344012 |
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| Protein GI | 77165487 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGACA AGGCGCATCC TGAAGCAACC CGCTTCCGGG CTAAACAAGT CGAAATACTT
TATGAGCAAT CGCATGTCGG ACAGGCCGCC AGCATAGTGG CAGCACTCAT CCTTATCGCA
GTATTCTGGA CCGTGACGCC ACATAGAACT CTGGCGGGCT GGGCCTTCTT CTTTACGCTT
GTCACTGTAC TGCGAGTTGG ATTGGCTCAT CGATACGCTC GCTCACCGGA CCACTCCAAG
CAGGTGGGTG AGTGGCTAGC ATGGTTTATG ACAGGGATAG GGATCTCCGG TGCAACCTGG
GGCTCGGCAG TTATTTTCCT TGTCCCCAAT GGTTCCCTGG TTCATACGGG ATTCGCAGCC
CTTTGGATCT GTGGATTATC CGCAGGCGCA ATAGCTACCT TCTCTATTAT TAAAGGCGCT
TTCTTTGCTT TTTCGCTTCC TGCGCTGCTC CCCAGCGCCT TGTATTTGAT AATAAGCGGA
GACATGAAAG AAGCCACCGT GGGGGGAGCG CAGTTGATGT TCCTGGGATT TATCTCTCTC
AGCGCGGTGC GGATGCACAA AACCCTAGTG CAAAGTTTAA CCCTTCAATT TGAAAACGCC
CGCCTGGTAG ATCATCTGGA TACGGAAAAA AAGAAGGTGG AGAAACTCAA CGAGCAACTA
GAAAAAAAGG TGCTCAAGCG AACCGCCGAA CTTGCCCAAG CCAATGCCAA TCTACAACGA
GATATTATCA AGCGCCAGCG TGCTGAGCAA GCTTTGTTCG CAGAAAAAGA GCTCCTTCAA
ATCACCCTCC ACTCTATCGG GGATGGGGTC ATTACCACGA ACGCCGAAGG CATCGTCGAA
TACTTGAACC CAGTCGCGGA AAAATTGACC GGCTGGTCGT GTGACAAAGC ACGGGGTTTA
CCGCTAGCAA CTGTGTTTCG GGTCATCGAC GAACAGACCC GTGAACCCAT TGCTGACCCT
ATCGCCCAGT GCCTAAAGGA AGGGGGCGCA ATCGAAATAG CAAATCATAG TGTGGTCATT
AGCCGGAACG GCCAAGAATA TGCTATTCAG GACTCGGCTG CTCCGATTAG CAGCCGCACG
GGAGAAGTAT TAGGCGTGGT TTTAGTATTC AGCGATGTCA CCGAAGCGCG CCATATGACG
CGTCAGATCA CCCACCAGGC CACCCATGAC TCATTGACCG GCCTAGTTAA CCGACGGGAG
TTCGAGCACC GCTTGGAGCG GGTGCTGGCA ACATTAAAAG CCGAATCGGC CGAGTACGCC
CTATGCTACT TTGATCTCGA CCGCTTCAAG GTCATCAATG ATACCTGCGG ACATGTAGCA
GGAGACGAAC TACTGCGGCA AGTCTCGGAA GTACTAAGGG GGCAAATTAG AAAACGGGAT
ACTTTAGCCC GTCTGGGTGG AGATGAGTTT GGGGTATTGC TAGAGCATTG TTCTCTAAAA
CAAGCCCAGC GGGTAGCTAC CGCAATACAC AAGGCTATCG AAGACTTTCA ATTTACTTGG
GAGGGCAAAA GTTTCCGTAT CGGTGTAAGC ATTGGGTTGG TTCCCATCAC CAAGGCTAGC
ATGGGAATCG CGGTAGTGCT AAAAGCTGCG GATACTGCCT GTTATGCGGC TAAAAACAAG
GGCCGTAACC GTATTCATGT GTACCACGAA ACTGATAAGG AACTAGCCTC TCACCGGGGA
GAAGTGCAGT GGATGACCCG AATACACCGC GCTCTTAAGG AAAATTACTT CCAAGTATAT
TTCCAACCCA TCATACCCCT TGCAACCGAA AAAGAGGAGA AGTGCTATGA GGTATTTCTG
CGGCTGGAGG ATGGCGCGGG AGGAGTAGTT TTACCTGGCG CTTTCTTACC GACAGCGGAA
CGTTATAATC TTGCAGTTAA AATTGACCGC TGGATGATCG CTAATACCTT TACCTGGTTA
GCCCAGAATC CTGAACCCCT GCGCACCTGT TTCATCAATT TGTCCGGGCA CTCACTCAGA
AACAAAACCT TTCTGGCCTT TATTATCGAG CAGCTTGAGA AAACCCCCAT ACCGTCTATC
CAGATATGCT TTGAAATCAC CGAAGCAGCA GCAACCGCCA ATCTCTCCTG TACCATCCGC
TTCATCAAAT CGCTAAAATC CCATGGTTGC AAGTTCTCAT TGGATGACTT TGGCAGTAGC
CTATCTTCCT TTGCTTATCT CAAAAATTTA CCGGTGGATT TTTTGAAGAT CGATGGTCTT
TTTGTAAAAG ACATCCTAGA CGATCCCATC GATTTAGCCA TAGTTCGCTC AATCAATGAG
ATAGGGCAGA TTATGAAAAA GCAGACGATA GCCGAATGGG TAGAAAAGGA AGAAGTACTA
GAGAAACTGC GAGAAATTGG TGTAAATTAT GCCCAAGGGT ATTGGATTAA TCCGCCCCAG
CCTCTCACAG AAATGAAATC CCCGCAAAAA AGATAA
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| Protein sequence | MLDKAHPEAT RFRAKQVEIL YEQSHVGQAA SIVAALILIA VFWTVTPHRT LAGWAFFFTL
VTVLRVGLAH RYARSPDHSK QVGEWLAWFM TGIGISGATW GSAVIFLVPN GSLVHTGFAA
LWICGLSAGA IATFSIIKGA FFAFSLPALL PSALYLIISG DMKEATVGGA QLMFLGFISL
SAVRMHKTLV QSLTLQFENA RLVDHLDTEK KKVEKLNEQL EKKVLKRTAE LAQANANLQR
DIIKRQRAEQ ALFAEKELLQ ITLHSIGDGV ITTNAEGIVE YLNPVAEKLT GWSCDKARGL
PLATVFRVID EQTREPIADP IAQCLKEGGA IEIANHSVVI SRNGQEYAIQ DSAAPISSRT
GEVLGVVLVF SDVTEARHMT RQITHQATHD SLTGLVNRRE FEHRLERVLA TLKAESAEYA
LCYFDLDRFK VINDTCGHVA GDELLRQVSE VLRGQIRKRD TLARLGGDEF GVLLEHCSLK
QAQRVATAIH KAIEDFQFTW EGKSFRIGVS IGLVPITKAS MGIAVVLKAA DTACYAAKNK
GRNRIHVYHE TDKELASHRG EVQWMTRIHR ALKENYFQVY FQPIIPLATE KEEKCYEVFL
RLEDGAGGVV LPGAFLPTAE RYNLAVKIDR WMIANTFTWL AQNPEPLRTC FINLSGHSLR
NKTFLAFIIE QLEKTPIPSI QICFEITEAA ATANLSCTIR FIKSLKSHGC KFSLDDFGSS
LSSFAYLKNL PVDFLKIDGL FVKDILDDPI DLAIVRSINE IGQIMKKQTI AEWVEKEEVL
EKLREIGVNY AQGYWINPPQ PLTEMKSPQK R
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