Gene Noc_2018 details

Gene Information

• Locus tag: Noc_2018
• ID: 3705208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 2328980
• End bp: 2329525
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637738494
• Product: NUDIX hydrolase
• Protein accession: YP_344009
• Protein GI: 77165484
• COG category: [L] Replication, recombination and repair; [R] General function prediction only
• COG ID: [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTGATC GAGACGGCTT CAGAGCGAAT GTAGGGCTTA TCCTTTGTAA TCAGGATGAT 
AGGGTATTAT GGGCGCGGCG AGCAAGAGAG AAAGCATGGC AATTTCCCCA AGGAGGAGTC 
AAAGAAAGCG AGACTACTGA AGAGGCTGCC TACCGGGAAT TAGAAGAAGA AGTGGGGCTA 
GGCGTGGAGC ACGTCAAGAT CATTGGCTGC ACCCGCAGTT GGCTACGGTA TCGCCTACCC 
AACCGTTATG TCCGCTACGG TAATAAACCC CTGTGTATTG GCCAAAAGCA GATCTGGTAT 
TTATTTCGCT TCGTTGGAGA AGAGCAAGAC GTTCAGTTAA ATCTGACGGA TAAACCGGAA 
TTTGACTATT GGTGCTGGGT CAACTATTGG TATCCACTCC GTGAAATTGT GTATTTCAAG 
CGTAAAGTCT ATCAGCGAGC TTTGAATGAA TTGGCGCCTC TGATCTTTCC AGATCACCAA 
TCGCTTCCAC CAGCCCGTTC TAATTACCGA AAACGCCGCC GCCAAAAAAC AAGATCCCGT 
ATTTAG 

 

Protein sequence

MIDRDGFRAN VGLILCNQDD RVLWARRARE KAWQFPQGGV KESETTEEAA YRELEEEVGL 
GVEHVKIIGC TRSWLRYRLP NRYVRYGNKP LCIGQKQIWY LFRFVGEEQD VQLNLTDKPE 
FDYWCWVNYW YPLREIVYFK RKVYQRALNE LAPLIFPDHQ SLPPARSNYR KRRRQKTRSR 
I