| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2016 |
|---|
| Symbol | |
|---|
| ID | 3705206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2326908 |
|---|
| End bp | 2327924 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637738492 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_344007 |
|---|
| Protein GI | 77165482 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | [TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAA ATTTTTACGC GTTAACGGGA AAACCTTTTC AACTTAGCTC CGATCCTCGC
TTTTTTTATG GCAGCACAGT TCATAAACGG GCCCTGTCTT ATTTACGCTA TGGTCTTATG
CAAGGGGAGG GCTTTATTGT CATCACAGGC CCTATCGGCA CAGGTAAAAC AATGCTGGCC
CGGACCCTAG TCTCCGAGCT TACAGATAAT AACACCGTGG CAGCCCAAGT AGTTACCACC
CAGCTAGAAG CCAATGATAC GCTCCGTATT GTCGCTGCTT CCTATGGACT TCCCCATGAA
GGCGTCACTA AAGCGGCCTT ATTGAAGACC ATCGAGTGCT TTCTACTAGA ACGGGCTCAG
GAGGGAAAGC AAGTACTACT ATTGGTGGAT GAAGCCCAAA ATTTACCCCC TGAATCTATT
GAAGAACTAC GCATGCTCTC TAATTTTCAA GTGGGGGAGA GGGCATTACT GCAATGTTTT
CTTCTAGGGC AAGAGGAATT TCGGCGAACC TTGGCTTTAG AAAATATGGA GCAGCTGCGG
CAACGAATTA TTGCTGCTTA TCATCTCAAT ACCCTAGACA GAGATGAAAC CCAAGGATAC
ATTGAGCATC GCCTCAAATT GGTAGGGTGG AACGCCGATC CCGCAATTGC CGATGAAGCT
TATGATGCGA TCCATGAGCA CACTGGGGGA CTGCCCCGCC GAATCAATTC CCTCTGCGAT
CGCTTATTAT TGTACTCTTA TGTAGAGGAA AGCCATACTA TTGACGAGCA GGCTGTCAAT
ACGGTTGCCA GTGAAATAGC CGAGGAAAGC AGCCATATTA GAGGAAAAAC TGAAATACAG
GGAGAAACAA AAATACCGGT AGAGAAAAGC AGCCCTGATA TGGAGAATCG CCTTATTCAG
TTAGAAGAAA CCGTAGCTGC ATTGAAGAAG ATAATAGATA GATTTGCCGG TGAAGATCAA
TCTGATCCCC CTCCCTCTTT GGAATTACGC CGAATCTCCA CAGGTAGCAA AGAGTAA
|
|---|
| Protein sequence | MYQNFYALTG KPFQLSSDPR FFYGSTVHKR ALSYLRYGLM QGEGFIVITG PIGTGKTMLA
RTLVSELTDN NTVAAQVVTT QLEANDTLRI VAASYGLPHE GVTKAALLKT IECFLLERAQ
EGKQVLLLVD EAQNLPPESI EELRMLSNFQ VGERALLQCF LLGQEEFRRT LALENMEQLR
QRIIAAYHLN TLDRDETQGY IEHRLKLVGW NADPAIADEA YDAIHEHTGG LPRRINSLCD
RLLLYSYVEE SHTIDEQAVN TVASEIAEES SHIRGKTEIQ GETKIPVEKS SPDMENRLIQ
LEETVAALKK IIDRFAGEDQ SDPPPSLELR RISTGSKE
|
|---|
| |