Gene Noc_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2015 
Symbol 
ID3705205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2324969 
End bp2326360 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content49% 
IMG OID637738491 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_344006 
Protein GI77165481 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CTGTGTTTGG TTCGGGCTAT GTGGGCCTTG TGACGGGTAC TTGCCTAGCA 
GAAGTCGGCA ATGAAGTACT CTGCATCGAT ATCGACGAGC AAAAAATTGC GATGCTCAAG
CAAGGGGAAG TGCCTATCCA CGAACCTGGA TTAGACGCTT TGGTACAGAA GAATATAGCA
GGCAAACGGC TCGGCTTTAG CACCGATATT GCTCAAGGGA TCGCTCACGG GCTTTTCCAG
TTTATCGCGG TAGGTACACC TCCTGATGAG GACGGTTCTG CGGATCTCCA GTATGTATTG
GCAGTGGCGC GCAGCATTGG CAAAAATATG AAGGATTATC GTATTGTAGT CAATAAATCC
ACCGTGCCTG TGGGAACGGC TGATAAAGTT AAGGATACTA TTTACGAAAC TCTGGGAGAA
CGAGGTGTAA ATCTTGAGTT CGACGTGGTC TCTAATCCCG AATTTCTTAA GGAAGGCGCG
GCTATTGAAG ACTTTATGAA GCCTGATCGG ATCATTGTCG GTGCCGATAA CCCTCGCACT
ACTGAACTGC TGAGGATACT ATACGCGCCT TTCAATCGAA GCCATGATCG CCTAGTAGCA
ATGGATATAC GCTCTGCGGA GTTGACTAAG TATGCGGCTA ATGCCATGTT GGCCACCAAA
ATTAGTTTTA TGAATGAAAT GGCCAATCTG GCTGAAAAGC TTGGCGCGGA TATTGAGCAA
GTCCGCCTGG GGATAGGCGC CGATCCACGA ATTGGCTACC ATTTTATCTA TCCGGGTTGT
GGCTACGGCG GTTCCTGTTT TCCTAAGGAT GTTAAGGCCC TAGAGCGAAT TGCCTGGGAA
GTAGATTATA ATGCCGACTT ACTTAATGCG GTAGAAAGGG TAAACAATCA GCAAAAGCAA
ACCCTTTTTA ACAAAATTCA AGGCCATTTT AAGGGTCAGC TCGCGGGACG GACTATTGCA
CTTTGGGGTT TAGCTTTCAA ACCTAATACC GACGATATGC GCGAAGCGCC CAGTCGTACC
CTCATGGAAG CGCTCTGGAA AAGCGGAGTT CGAGTTCAGG CCTATGATCC AATCGCTAGC
AAGGAAGCGC AGCGCATTTA TGGCAGCCGG CAGGATTTGA CTTTATGCGA GACTCCAGAA
GCGGCTTTGG AAGGTGCCGA TGCGCTCGCA ATAACTACGG AATGGAACGT ATTTCGGAGT
TTGGACTTTG AAGGGGTTAA AACTACCCTC AAAACACCAG TCGTATTCGA TGGCCGCAAT
CTGTACGATC CGGGCCTCGT AGCAAGCCAG GGTATCGTTT ATTACTCGAT CGGCCGGCCA
ACAGTGGCAG TTAGAACCCC CGCCGACCTT TCGGCGGATC ACTCTCGTTT GCCGGATATC
TCTAGTCTAT AA
 
Protein sequence
MKVTVFGSGY VGLVTGTCLA EVGNEVLCID IDEQKIAMLK QGEVPIHEPG LDALVQKNIA 
GKRLGFSTDI AQGIAHGLFQ FIAVGTPPDE DGSADLQYVL AVARSIGKNM KDYRIVVNKS
TVPVGTADKV KDTIYETLGE RGVNLEFDVV SNPEFLKEGA AIEDFMKPDR IIVGADNPRT
TELLRILYAP FNRSHDRLVA MDIRSAELTK YAANAMLATK ISFMNEMANL AEKLGADIEQ
VRLGIGADPR IGYHFIYPGC GYGGSCFPKD VKALERIAWE VDYNADLLNA VERVNNQQKQ
TLFNKIQGHF KGQLAGRTIA LWGLAFKPNT DDMREAPSRT LMEALWKSGV RVQAYDPIAS
KEAQRIYGSR QDLTLCETPE AALEGADALA ITTEWNVFRS LDFEGVKTTL KTPVVFDGRN
LYDPGLVASQ GIVYYSIGRP TVAVRTPADL SADHSRLPDI SSL