Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2006 |
Symbol | |
ID | 3705196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2313877 |
End bp | 2315133 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637738483 |
Product | putative oxidoreductase |
Protein accession | YP_343998 |
Protein GI | 77165473 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.113232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCAGA CTCATCACAG GCTGCTCATT GTGGGTGGCG GCGCCGCTGG TATTTCAGTG GCGGCCAATA TGCGCCGTAA GGATAAAGCC ATGGACATTG CTATTATCGA ACCTAGTGAG GTTCATTACT ATCAACCCGC ATTTACGTTA GTGGGGGGCG GCGTCTATGA TTTTGACAAG ACCAAGCGCC AGGAACAGGA TCTGATTCCT AAGGAGGTGG AATGGATTCG CGACTATGCC GAATCCTTTC AGCCAGAGAG TAATTCGGTT ACATTGCGCT CGGGAAGTTC GGTGAGTTAC GATTATTTGG TCGTTTGCCC TGGTATTCAG CTTGATTGGC AGAAAATCGA GGGACTTAAA GAGACTCTTG GCAAAAACGG CGTCAGCAGC AATTATTCTC CGCACACGGC GAGCTATACT TGGGAATGCC TCCGGGATTT CCAGGGAGGC ACAGCCTTGT TTACCCAGCC GCCGATGCCT ATCAAGTGCG CTGGTGCGCC ACAAAAAGTG ATGTATCTAG CCGCAGAGCG GTTTCGCCAG CGTAAGGTAC TCGATAAAGC TAACCTAGAA TTCTGCAATG CCGGTCCCAC GATGTTCGGT GTTCCGTTTT TCGCCGAAGC TCTAGATAAA GTGGTAGCCG GTTACGGCAT TAAAGCGAAT TTCGGTTGTA ACTTAGTTGC CATAGACGGA CCCGGCCATA CCGCAACTTT TGAGACGACC GGGGCCGACG GTAGCAAAGA AAGAATCAAT AAATCCTTCG ATTTTATCCA TGTAACGCCG CCTCAAAGTG CCCCTGACTT TATTAAAAAC AGCCCTCTGG CTAATGCCGC AGGATGGGTG GAATTAGATG AAAATACTTT GCAGCACCCC CGCTTCAGTA ATATTTTTGG TCTTGGCGAT GCGGGCTCGA CGAGTAACGC CAAAACCGCT GCAGCAGTGC GCAAGCAGGT TCCGGTCGTG GTGCAGAATA TCCTGGCGCT GATAAACGAC AAAGCACTCG AGCCAAAATA CGATGGCTAT GGCTCGTGCC CACTGACCAC TTCATTGCAC CGTGTGATGC TGGCCGAATT CTCCTACGGC GGCAAGGTAA CCCCATCGTT TCCTATACTT GACCCACGCA GTAACCGCCT AATCTGGTGG TGGCTGAAAA AATACGGCCT CCCGCCCCTG TACTGGGACT ACATGCTGAA AGGCTATGAC TGGGATATTC CGCACAAGGC ATCTTATGCA GAGAAACTGG TTGCGGCAAC CGCATAA
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Protein sequence | MAQTHHRLLI VGGGAAGISV AANMRRKDKA MDIAIIEPSE VHYYQPAFTL VGGGVYDFDK TKRQEQDLIP KEVEWIRDYA ESFQPESNSV TLRSGSSVSY DYLVVCPGIQ LDWQKIEGLK ETLGKNGVSS NYSPHTASYT WECLRDFQGG TALFTQPPMP IKCAGAPQKV MYLAAERFRQ RKVLDKANLE FCNAGPTMFG VPFFAEALDK VVAGYGIKAN FGCNLVAIDG PGHTATFETT GADGSKERIN KSFDFIHVTP PQSAPDFIKN SPLANAAGWV ELDENTLQHP RFSNIFGLGD AGSTSNAKTA AAVRKQVPVV VQNILALIND KALEPKYDGY GSCPLTTSLH RVMLAEFSYG GKVTPSFPIL DPRSNRLIWW WLKKYGLPPL YWDYMLKGYD WDIPHKASYA EKLVAATA
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