| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1997 |
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| Symbol | |
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| ID | 3704881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2299407 |
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| End bp | 2300765 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738473 |
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| Product | sigma-54 specific Fis family two component transcriptional regulator |
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| Protein accession | YP_343989 |
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| Protein GI | 77165464 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAGTA AGAAAAACTT GCTGATCGTG GAAGATGATC TTGGCTTGCA GGGCCAGTTG
CGGTGGGCTT TTTGTGGTTA TGAAATAGCA GTAGCTAAGG ATCGTCAGGA AGCGGTTGCA
TTAGTACGCC GCCATGAACC TCCGGTAGTA ACGTTAGATC TTGGTTTGCC TCCTAACCCT
GGTGGCGTCA GCGAAGGCAT GGCCTCCTTG CAGGAAATCC TGGCTCTGGC GCCCTATACC
AAAATCATTG TGATCACAGG GAATGACAGC CAGGAGCATG CGGTGCAAGC AGTGGGGGCG
GGTGCCTACG ATTTTTATTC GAAGCCCATC GATCCCGACA TTCTTAAATT GACGATTGAT
CGGGCTTACC GGCTTTATGA ATTGGAGATG GAAAATCGGC GTTTACGGCG GGCTGGTCAT
TCCTCCCTGG AAGGGGTGAT TGCCGTCAGC CCTGGAATGA AGAAAATATG TCGTACCATT
GAGAAGATCG CACCCGCTGA TGTCACTGCG TTTATTTTGG GTGAGAGCGG TACAGGCAAG
GAAGTTATTG CTCGGGCCTT GCACCAACTG AGCTATCGCC GAGAGCAAAC TTTCGTGGCT
ATTAACTGCG CGGCTATTCC GGAGAACCTT TTGGAAAGCG AGCTTTTTGG CCATGAAAAA
GGAGCCTTTA CGGGGGCTGT GAGACAAACC CGGGGCAAGA TTGAATACGC TCATGAGGGT
ACTTTGTTCT TAGATGAAAT CGGGGATTTG CCCCGGGGCC TCCAGGCCAA GCTGCTGCGT
TTTCTGCAAG AACGGGTGAT TGAGCGGGTG GGTGGCCGTG AAGAAATCCC TGTGGATGTG
CGGGTTATCT GCGCGACCAA CCAGGATTTA AAAGAGCTTA TTGCTCAAAA CCAATTTCGG
GAAGATCTAT ATTATCGAAT TGCCGAAGTT ACCGTGACTC TTCCGCCTTT GCGGGAACGC
CCGGGCGATG CGGTAGTCAT TGGGCGGGCG CTGCTTGAGC ATTTTTCGCG CACGCAGGGT
AAAGCGGTCC GCGGTTTTAC AGATGATGCT ATTAGAGCTA TTGAGACTCA TACCTGGCCT
GGCAATGTTA GAGAACTAGA AAATTGCATA AAACGGGCTG TGATAATGGT GGAAGGCAAC
CGTATTGCGT CGGAAGATTT AGACTTGCCC GCCTCTGCCT CCCCCGAACA GCAATCTTTG
TCCTTAAATT TGCGTCAAAT ACGGGAGCAT ACTGAACGGG AGGCGCTTAC CCGCGCCATC
ACCTTGGTGA ATGGCAATCT CTCACGGGCA GCGGAACTCT TAGGGGTGAC TCGTCCTACT
TTATACGCAT TATTAGATAA ATATGAAATG CGTGGTTAA
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| Protein sequence | MSSKKNLLIV EDDLGLQGQL RWAFCGYEIA VAKDRQEAVA LVRRHEPPVV TLDLGLPPNP
GGVSEGMASL QEILALAPYT KIIVITGNDS QEHAVQAVGA GAYDFYSKPI DPDILKLTID
RAYRLYELEM ENRRLRRAGH SSLEGVIAVS PGMKKICRTI EKIAPADVTA FILGESGTGK
EVIARALHQL SYRREQTFVA INCAAIPENL LESELFGHEK GAFTGAVRQT RGKIEYAHEG
TLFLDEIGDL PRGLQAKLLR FLQERVIERV GGREEIPVDV RVICATNQDL KELIAQNQFR
EDLYYRIAEV TVTLPPLRER PGDAVVIGRA LLEHFSRTQG KAVRGFTDDA IRAIETHTWP
GNVRELENCI KRAVIMVEGN RIASEDLDLP ASASPEQQSL SLNLRQIREH TEREALTRAI
TLVNGNLSRA AELLGVTRPT LYALLDKYEM RG
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