| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1968 |
|---|
| Symbol | |
|---|
| ID | 3705427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2254922 |
|---|
| End bp | 2257018 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637738444 |
|---|
| Product | UbiE/COQ5 methyltransferase |
|---|
| Protein accession | YP_343960 |
|---|
| Protein GI | 77165435 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGC TGGATGCCTC TACCATGGCA CATGAGCATC GCACCCAGCG AGAGGACCTG
GCTTGTCCTC GTTGTGCTGG CGCCATTGTG GCCAATGATA CAGAGCTTGG GTGTGTTGCC
TGTGGCGCCA GTTATCCCAT TCGTGATGGC ATTATAGATT TTCGTTGCCA TCGTCATGAT
TATTATTTTA ATCCCCTCTC CCGGGAGGCA ATGGGAGAGC TCACCCGTGA GGCGCACCAC
GTACCATGGG CGAATACTGT ACGGCGTTTC CTTAGGGGGG TGAGACAAAA CCCCGACTGG
CTCGATAATC TGGTTGCTGA CGGTCGCTAT GCCTGGAAGC TGCTGTTACG GTTGCCGCCA
AATGCCCACG TTCTTGATTT AGGTTGCGGG CTAGGGAATT TGACTAAAAA TATCGCACCA
AGCGCAGGCC GCGTGTATGC TTTGGACTTA ACTTTCGAAC GACTTAAGCT GGCTCGGGTA
CGCTTTGATC GCTTCAATCC AAATGACGAT ATCGTATTGC TTGCTGGGGG CGATGGAGCC
TCTCTGCCAT TTCCGGATGG CAGTTTGGAT TGTGTAACGC TTTCGGGCGT ATTAGAGTGG
GTAGCCGATG ATCAAAGCGT TTGGGATCGA GGGGGTTCTC GGCTGGAAAA AGCAACAGGG
GCGTTTTTAA GTTTCTTTGG CGCTGCTAAT CCGCGTAAAA TCCAGCTCCG TTTCCTGAAC
GAGATACGGC GGGTGTTAAA GCCAAAAGGT CAGCTTTTTA TCGCTATTGA AAACCGTTTG
AGTTATCGCT ATTTTGGTGG TCGTCGTGAT CACCACTCGG GTCTGTGGTT TGCTTCGTTG
TTGCCCCGTT TTTTAGCAAA TATTTACTCT ACCGCTGTGG CTCGTCGTCC TTACCGGACT
TATACTTATT CCATCAATGG TTACCGACGG CTCCTTAACG CCGCTGGATT CTCACACCAG
GAAGTTTACG GGCTCGCCCC GGGTTATACT CACCTGGCTG AACTCCTCCC ACTCCAGACG
GATAAGCATC TTTGGCAGCC TCCTGGCTCT CAGGGTTTTG ATCATATCCG GCGCAGCCGG
AATTTTGTTC CCGCCTACGG AATTATTGCT TCACCACGGG TGCCTACCGG TTTGTCGTTA
GCGGAGAAGA TAGCGGCGGC GATTGAATCT CAGCTCAGCC TCGATGGGAA TTCTGTATCC
TTCGCCCATT TCCACACGAC CGGCAAAGGC AAGGGAGTCA TCAGTGGTCA TACCAAGCAT
GGTCCAATAA TTGTAAAATT ACCCTTTAAT AATTCTGCTA TAGCAGGCGC CGAGCGCAAC
CATCAATTCC TTCAGCAGGT GGCGTCCATG GGGAAGGTTC GGGAATTGCT TCCGCGAGCG
CTCGCAGCAG GCAAAATTCA AGGGGTGCCC TATTATGTCG AGAGTCGGGT GGAAGGTCGG
CTATTACGAG CAGAGTTGGG AAGACAGAAC CAGTTGGATT TTCTCAAGGC CGTAGCGGGT
TTTTTACAAA TATTTAATTC CGATTTCCAT GAGCGGGCGC CAGAGGAACT GTCAGGCGAG
TTCTATCGGC ACCAAGTGAG CTTACCTCTA GAGCAAGTAG CTGACGCTTT AGAGGATCCA
GCCCTTATAG AGGAGGCGAA ATCCTATTTA CGAGATCAGC TATATGGTCT GCGCGTACGC
CGTGGACGAG CGCATGGCGA TTTTAGCACG AGTAATATTT TCGTTCGAGG CTCCGAAATA
AGCGGGGTGA TTGATTGGGA TAATTCTGAT CTTTTAGGGA TACCGATATT GGATGCGCTT
AACTATCTGG AAAGCGCCCA TCGCTATTTG AACGCTGATA TGAGCCTTGC ACAGACAATA
CCATTGCTTG CGGATAAGGA TCAGCTCAAT GAGAAAGAGC AGCAATTTCT TGAGGAAAGC
TATAATCGTT GTGGTATCGA TTCCAACCAC CATGCCGCTT TTGTCTCTCT CTACTGGTTG
CGGCATGTGG CCCAGCAACT GGATGAAGGG CTTATCTATA ATGCCCCTGC CCTTGAAGAG
CGGGTAACGG CAGTGCTCAA AGGGCTATTG AAGTCTCATA GTCGATCAGA CTCGTAA
|
|---|
| Protein sequence | MSSLDASTMA HEHRTQREDL ACPRCAGAIV ANDTELGCVA CGASYPIRDG IIDFRCHRHD
YYFNPLSREA MGELTREAHH VPWANTVRRF LRGVRQNPDW LDNLVADGRY AWKLLLRLPP
NAHVLDLGCG LGNLTKNIAP SAGRVYALDL TFERLKLARV RFDRFNPNDD IVLLAGGDGA
SLPFPDGSLD CVTLSGVLEW VADDQSVWDR GGSRLEKATG AFLSFFGAAN PRKIQLRFLN
EIRRVLKPKG QLFIAIENRL SYRYFGGRRD HHSGLWFASL LPRFLANIYS TAVARRPYRT
YTYSINGYRR LLNAAGFSHQ EVYGLAPGYT HLAELLPLQT DKHLWQPPGS QGFDHIRRSR
NFVPAYGIIA SPRVPTGLSL AEKIAAAIES QLSLDGNSVS FAHFHTTGKG KGVISGHTKH
GPIIVKLPFN NSAIAGAERN HQFLQQVASM GKVRELLPRA LAAGKIQGVP YYVESRVEGR
LLRAELGRQN QLDFLKAVAG FLQIFNSDFH ERAPEELSGE FYRHQVSLPL EQVADALEDP
ALIEEAKSYL RDQLYGLRVR RGRAHGDFST SNIFVRGSEI SGVIDWDNSD LLGIPILDAL
NYLESAHRYL NADMSLAQTI PLLADKDQLN EKEQQFLEES YNRCGIDSNH HAAFVSLYWL
RHVAQQLDEG LIYNAPALEE RVTAVLKGLL KSHSRSDS
|
|---|
| |