Gene Noc_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1961 
Symbol 
ID3704975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2247729 
End bp2248820 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID637738437 
Producthypothetical protein 
Protein accessionYP_343953 
Protein GI77165428 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGGT TTTCTTGGAT TAGCCCTCCC TCTGGTAGTG GGGCGGAGGA GTTTGGGTTT 
TGGCGTGTAG TGCCTGCTAG GGAATTGATA ACAACCTATA GGACTCATTG GCAGCAGTTA
AATTCCCATC ACTATAAAAA CCATCCTTTA TTGGATATCC GCTTTGTTGG TTTATTGCTT
GAGTATTTTG GTGCCGACGA TGTCTTTCTC GTCGTATATC AGGAGGGTGA ATCTGTCACT
GGCTTGCTGC TGCTTCGATC GGAGAGAAAT GGAATGTGGA ATACGTTTCT GCCAAGTCAG
GCGCCCATTG GACCTGCCCT ATTAGGAGGC AGCGCAGGCT ATTCGGCACT TCGTAAATTA
TTTCCTGCTC TGCCCGGCTA CGCTTGGGGT TTGGGACTTG CCTGCCAGGA TTCGGACTAC
GCTATTCAGA TGCGACCGAT GGATTATAAA CACATGCTGA CTATACCCCA CTGGAATACT
ATACAAATCA AACTGGAAGG TTCCTTTGAT GCCTTTTGGA ATCAACGGTC GAAGAATCTG
AAGAAAAATA TTTATCGCTA TCTGCGGCGC GTAAAAAAGG TGGGCCTCAT TCCTCGTTTG
GAAGTTATAC GAAATTTAGA CTCTATGGGA GAAGCGGTAG ATCAGTACGG AGAGCTTGAG
TCCAAAGGTT GGAAGGGGCG ATTGGGAACC GCATTACATA GAAATAATGT ACAAGGTCAA
TTCTATCGAC AAGTAATGGA GGCGTTTGCC CAAGAGGGAA ACGCTGCAGC CTGGAATCTC
TATTTAGGAG ATAAGCTTGC TGCTTCCCGT CTAACCATTA CCGGGGGCGA CATGACTGTA
ATACTAAAAA CGGCCTTTGA TGAGGCGCTT TCTCGATATG CGCCCGGGCG TCTGTTGTTA
TATTTGTTTT TAGAGCGTAT CTTTCAGGAA GAAAAAGGAA GTACTCTCGA GTTCTATACT
AATGCTACCC AAGACCAACT TGCCTGGTGT ACGGGTTCAA GATCCATTTA TCATATAAAT
TATTATCGAT ATCCTCTCTA TCGATGGGGT GTAGCGACTA CGAAGAGAGT TGGAGCATTA
TGGCAAGGGT AA
 
Protein sequence
MQRFSWISPP SGSGAEEFGF WRVVPARELI TTYRTHWQQL NSHHYKNHPL LDIRFVGLLL 
EYFGADDVFL VVYQEGESVT GLLLLRSERN GMWNTFLPSQ APIGPALLGG SAGYSALRKL
FPALPGYAWG LGLACQDSDY AIQMRPMDYK HMLTIPHWNT IQIKLEGSFD AFWNQRSKNL
KKNIYRYLRR VKKVGLIPRL EVIRNLDSMG EAVDQYGELE SKGWKGRLGT ALHRNNVQGQ
FYRQVMEAFA QEGNAAAWNL YLGDKLAASR LTITGGDMTV ILKTAFDEAL SRYAPGRLLL
YLFLERIFQE EKGSTLEFYT NATQDQLAWC TGSRSIYHIN YYRYPLYRWG VATTKRVGAL
WQG