| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1942 |
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| Symbol | |
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| ID | 3705479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2222474 |
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| End bp | 2223949 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637738418 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_343934 |
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| Protein GI | 77165409 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAAA GCAAGACTGA GCCTGGTGTT CGGCACTCGA TAGTGGTTAC AACGTTGAAC
CGCTATGCAG TTTTAGTGAT TTCCTTGGTC TCCACGATGG TGTTGGCGCG CTTGCTTACG
CCGGCCGAGA TCGGCATTTT TTCCATGGCG GTGGTCTTCG TGAACCTTGC CCATTCCATG
CGTGACTTTG GCGTAGGCCG GTACATCGTT CAGGAGAAGG AGCTTACCGT AGATCGTATC
CGGTCCGCCT TCGGAATCAC GTTGGGTATC GCCTGGTCTA TGGCCATTGT GCTAGCAATT
GCAGCGCCTT GGGTTGCTGA TTTTTATGGG GATGAAAGGG TGACAGGAAT CCTGCGGGTG
CTTGCCGTTA ATTTCGTTTT AATTCCGTTT GGCTCCGTGG TTCTCTCTTA CTTGAACAGG
GAAATGCAGT TTACCACTAT TTTCCTGGTG GGCGTCATTA GTGAATTTGT CCGGGCTGCG
AGCGGTATTT GGTTTGCATG GATAGGACTT GGCGCTATGA GTTTAGCATG GAGCGCACTT
CTTGGGGTAA TTGCCACAGT AGTATTGGCG CGTATTCTAG GGCCTAGCCA CTTCATCCTG
CGCCCAGCAT TTTGTGAATG GCGGAGGGTT ATGAGCTTTG GCGGACGGGC CACGCTTGCA
ACCATTGCAT TCCAGTTTCA GCGGGGAGCG CCTGAGGTAG TCATTGGCCG GTATTTGAGT
GCTGCAGCGG TAGGTTTCTT CAGCAAAGCT CTTGGGGTTA TTCGGCTCTT CGACCGCACG
GTGCTATCGG CGGTAAGCCC GGCAATTTTG CCCCACATGG CGGCCAAGCA CCGCTCGGGA
GAGAGTGTCG CGGGTTTTTA TGCCCATGGG CTTGGGTTAA TTACCGCCCT CGCGTGGCCA
TGCTATGCTT TTATCGCCAT CATGGCGTTC CCGGTGGTAC GAATTCTGTT CGGCGATCAG
TGGGATGCTG CGGTTCCCCT GGCGCGCATT CTGGCCATCT ATGCGGCGGT CGATGCTTTG
TATGCGTTTA CCGCGCAGGC GCTGATTGCG GTCGGTGCGG TACACCTGCT GGTGCGGCTA
AGGGTGGCTA CCCTTTTAGC GACGGTTTTG GCGCTGGTGC TGGCTGTTTC TTATGGGTTA
GAAGTTGTTG CTTTTGCGAT GGTTTTTCCG GCTGTAGTGG GGCTGATCTA TTCCTCTTTG
CTGATGCGTT CAGCTATTGG TCTCAAGGGT AGGGTTTACC TAAAGGCCAC TGCCGCAAGC
TTATTGATTA CCGCTGCCAC AGTAGCGTTC CCCTTGTTCT ATCTGGGGAT GCCGGCGGCA
GTTGGGCAGC CCCATTGGCA ATTTTTTATT ATTAGTGCTG CCGGCGGCAG TGCAGGCTGG
ATGGTGGCTG TAATTACGCT TCGTCATCCT ATTTGGGACG AGTTGAGACT TCTATTTTCC
CAGGCTCGGA ATCGGTTATG GCCGGTTAGC AGTTAG
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| Protein sequence | MLESKTEPGV RHSIVVTTLN RYAVLVISLV STMVLARLLT PAEIGIFSMA VVFVNLAHSM
RDFGVGRYIV QEKELTVDRI RSAFGITLGI AWSMAIVLAI AAPWVADFYG DERVTGILRV
LAVNFVLIPF GSVVLSYLNR EMQFTTIFLV GVISEFVRAA SGIWFAWIGL GAMSLAWSAL
LGVIATVVLA RILGPSHFIL RPAFCEWRRV MSFGGRATLA TIAFQFQRGA PEVVIGRYLS
AAAVGFFSKA LGVIRLFDRT VLSAVSPAIL PHMAAKHRSG ESVAGFYAHG LGLITALAWP
CYAFIAIMAF PVVRILFGDQ WDAAVPLARI LAIYAAVDAL YAFTAQALIA VGAVHLLVRL
RVATLLATVL ALVLAVSYGL EVVAFAMVFP AVVGLIYSSL LMRSAIGLKG RVYLKATAAS
LLITAATVAF PLFYLGMPAA VGQPHWQFFI ISAAGGSAGW MVAVITLRHP IWDELRLLFS
QARNRLWPVS S
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