Gene Noc_1938 details

Gene Information

• Locus tag: Noc_1938
• ID: 3705475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: -
• Start bp: 2216225
• End bp: 2216809
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637738414
• Product: hypothetical protein
• Protein accession: YP_343930
• Protein GI: 77165405

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGTGGAA CTCGTTTGCC TGGGACTCCA ATCGAAGCGA TCTCATCATT TATGGGGGCG 
GTCACGCCAA TTACAACGGT AATGACGTTT ATCGATGGCG CGGCACCACG CGCTTATGGG 
AACAGGCCTC CCTGCCTAGC CAGATCACCC AAGATGACCT GGGTTTTATT ATGCCAGTTG 
ATGGTCCTGA TGCTGCGCCA CCATCTACTC ATACCTACGA CAGCAACATT TTCCCATGTA 
GAGCGTGAAG GGTCCCCTTT CCAATTTGTG TACCGTGCTC ATCGGCTATT ACAGCGTGGA 
ATGAGCCTCG CAGCGGTGTT GAGTGGACCG AAAGTGGCGC GGGCGGCAGC GGTGCCGATT 
TATAATGCCG TTGCTGATAG CCAAGCGGGG GTGGGTTGGG ATCCCCAGTG GCTTGAGATT 
GATATCGCTG CTGGTATCCA AGCCACGAGC AATGGCCAAG CCAACCACGG CTGGCGCCTA 
GTGTCTGTGA GTGGTAATAG TAATCTTCAA CGTTTCCGCA GCAATGATTA TACGGCCGAT 
CCCACACTCA TGCCTAAACT TACCATCGTA TATACTAATG ATTAA 

 

Protein sequence

MRGTRLPGTP IEAISSFMGA VTPITTVMTF IDGAAPRAYG NRPPCLARSP KMTWVLLCQL 
MVLMLRHHLL IPTTATFSHV EREGSPFQFV YRAHRLLQRG MSLAAVLSGP KVARAAAVPI 
YNAVADSQAG VGWDPQWLEI DIAAGIQATS NGQANHGWRL VSVSGNSNLQ RFRSNDYTAD 
PTLMPKLTIV YTND