| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1935 |
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| Symbol | |
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| ID | 3705472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2213065 |
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| End bp | 2213928 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738411 |
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| Product | RpoH |
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| Protein accession | YP_343927 |
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| Protein GI | 77165402 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTGA CTGTACGCAA TGATAATGGG GCGTTAGTAC CCGTAGCCGT TGGTAATCTC
AATACCTACT GCCAAAATGC CCATAGCATC CCTGTGTTAA GTGCAGAGCA AGAACGATCC
CTTGCCCTTC GGCTTAGGCA GCATAATGAT CTGGAGGCAG CTCGGCAGTT GGTCCTCTCC
CATCTTCGTT TCGTCATCCG GATTGCGCGG GGATATAATG GTTATGGGCT TCCTCTGGCA
GATTTAATTC AAGAGGGCAA TATTGGTCTT ATGAAAGCGG TCAAACGCTT CGATCCAGAG
CAAGGAGTGC GTTTGGTGTC TTTCGCTGTC CATTGGATCC GGGCGGAAAT CCATGAATTC
ATTCTTCGTA ACTGGCGTAT CGTCAAAGTC GCAACCACCA AAGCCCAGCG CAAGTTGTTC
TTTAATCTGC GGAGCGCTAA AAAACGTTTA GGCTGGCTCA ATAGAAAAGA AGTAGATGAA
GTCGCCCAGG ATCTGGGTGT CAGCCCCAAG CAAGTAATGG AAATGGAGGC TCGCCTGAGC
AGCCAAGATG CGCCTTTTGA TGGCTCTAAC GCGGAGGAGA GCGAAAATGG CATCCCCGCG
CCGATGGCTT ACCTTGCAGA TCCATCTGCT GATCCAGCCC AGAAAATGGA GCTGCTGGAT
CAGGAAAATT ATTATGGCCA ACGGTTACAA CAGGCATTGG AAGTGCTAGA TTTGCGCAGC
CGCACTATCA TTAACCGCCG TTGGCTTCAA GAAAACAAAA GCACCTTACA CGAACTCGCA
GCGGAATACC AAATTTCTGC GGAGCGCATT CGCCAATTGG AAAATAACGC CATAAAGAAG
ATGCGTTCCG TACTCGCTGA CTAG
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| Protein sequence | MELTVRNDNG ALVPVAVGNL NTYCQNAHSI PVLSAEQERS LALRLRQHND LEAARQLVLS
HLRFVIRIAR GYNGYGLPLA DLIQEGNIGL MKAVKRFDPE QGVRLVSFAV HWIRAEIHEF
ILRNWRIVKV ATTKAQRKLF FNLRSAKKRL GWLNRKEVDE VAQDLGVSPK QVMEMEARLS
SQDAPFDGSN AEESENGIPA PMAYLADPSA DPAQKMELLD QENYYGQRLQ QALEVLDLRS
RTIINRRWLQ ENKSTLHELA AEYQISAERI RQLENNAIKK MRSVLAD
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