Gene Noc_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1931 
Symbol 
ID3705468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2208457 
End bp2209062 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID637738407 
Producthypothetical protein 
Protein accessionYP_343923 
Protein GI77165398 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0891144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCACCAA GGAGTAGAGC TAAACCTCTC CGGAGCCAGG TTAGGATTAT TGGCGGTCTC 
TGGCGTGGCC GGAAAGTCGA TTTTTCGGCC CGCCCGGGGT TGCGGCCCAC GCCTGATCGG 
GTTCGGGAAA CTTTATTTAA TTGGCTTCAG CCGGTAATCA GCGGCGCCCG TTGTTTGGAT 
CTGTTTGCAG GCAGTGGTGT GCTCGGTTTG GAAGCAAGTT CCCGGGGTGC AGCGGCAGTA 
GTCATGGTAG AGAAAGATCT ACGAGCGTAT CAAGCAATTC AGCTCCAGGT AGAACATTTT 
TCCGCCGAGA AGATAGAAGT CATTGCCGGT GATGCCTTGG CTTATCTGCG TGGTTCTGTG 
CGAAGTTTTG ATATTGCTTT TTTAGATCCT CCCTTTGAAA GCGGTTTGCT AGAACCCTGT 
TGCGCCTATT TGGAGCGTGG TGGCTGGTTG GTCCCCGGTG CTTATATTTA TCTGGAGACT 
CGGAGGCGCG ACCCTTTACC GTCTCTGCCG GTTACTTGGA CATTGTTACA TAGTAAGGAA 
GCGGGGGAGA TAGGGTATTA TCTGGCTCGT CGGATTTCTA ATGTCTCTGG AGCGGAAACC 
GAATAA
 
Protein sequence
MPPRSRAKPL RSQVRIIGGL WRGRKVDFSA RPGLRPTPDR VRETLFNWLQ PVISGARCLD 
LFAGSGVLGL EASSRGAAAV VMVEKDLRAY QAIQLQVEHF SAEKIEVIAG DALAYLRGSV 
RSFDIAFLDP PFESGLLEPC CAYLERGGWL VPGAYIYLET RRRDPLPSLP VTWTLLHSKE 
AGEIGYYLAR RISNVSGAET E