Gene Noc_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1928 
Symbol 
ID3705465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2207021 
End bp2207626 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content55% 
IMG OID637738404 
Productphosphoglycerate/bisphosphoglycerate mutase 
Protein accessionYP_343920 
Protein GI77165395 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID[TIGR03162] alpha-ribazole phosphatase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0314739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACGC TTATCGATCT GATTCGTCAT GGCGAACCTG TGGGAGGGCA CCGCTATCGG 
GGCCATAGGG ATGACCCTCT GAGTGAAAAG GGTTGGTCAC AGATGCGAGC GGCCGTTGGC 
GAAGATTGCC CCTGGGATCG GATCATGAGC TCTCCTCTCA AACGGTGCGC GGAATTCGCC 
CATGAGCTTA GTCAGCGCTA TGGGCGGCCT TTACAGCTAG ATGAGCGTTT GAAGGAAATT 
AGCTTTGGGG CTTGGGAGGG TTCTACGGCT GCCGAAGTCA GAGAGCGGGA ACCGGAGGCT 
TTCCGGCGCT TTTATGAAGA TCCTGTTCGC CATACACCAC CAGGTGCAGA ACCTTTCCTG 
GATTTCCGTG ATCGAGTTAT TGCTGCTTGG GAGGAATTAC TTAATCGCCA CGGTGGCGAG 
CATGTGCTGG TAGTCGCCCA TGCTGGAACG ATGCGGATGA TGATACGCTA CGTATTGGGA 
ATGCCTTTGG AAACCGTTTT TCGAATCCAT GTCCCTAATG CCGGCATCAG CCGGATTCAA 
GTGGGAGGAG AGGGACCGCG AGAGCGCTTA CAACTGCTGT TCCATGGGGC GAATTTACCT 
GCTTAA
 
Protein sequence
MPTLIDLIRH GEPVGGHRYR GHRDDPLSEK GWSQMRAAVG EDCPWDRIMS SPLKRCAEFA 
HELSQRYGRP LQLDERLKEI SFGAWEGSTA AEVREREPEA FRRFYEDPVR HTPPGAEPFL 
DFRDRVIAAW EELLNRHGGE HVLVVAHAGT MRMMIRYVLG MPLETVFRIH VPNAGISRIQ 
VGGEGPRERL QLLFHGANLP A