| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1925 |
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| Symbol | |
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| ID | 3705557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2202059 |
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| End bp | 2203987 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637738401 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_343917 |
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| Protein GI | 77165392 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.55144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATAT TTTCAGCGTT TGGATTAGTT GGTTGGGTCG TTTTTGGGTC TTTTGTCTAT
GCCGGTGAGC AGCAGACCCC AAAAACCCTA GAGCCGATAG TAGTGACGGC AACACGGACT
CCAACGCCAG TGCAAGATGT AGGGAGTGAT ATGAGTGTCA TTACCGCCGA GGATCTTGTT
CAGCGGCAAA GAATGCCAGT ATTAGAGGTA TTGCGGGGGC TGCCCGGGGT CGATGTGGTT
CAAAGCGGCG GTTTAGGACA GCAGACCTCG GTATTCCTGC GGGGGGCAAA CGCTAACCAT
ACCCTGGTAC TCATTGATGG GGTAGAAGCC AATGATCCCA GCAACCCCAG TGGTTCTTTC
GATTTCGCCA ATTTGCTGAC GGATAATATC GAGCGCATTG AGATTCTGCG AGGGCCGCAA
AGCACCCTTT ACGGTTCCGA TGTCATTGGT GGCGTTATTA ATATTATTAC TAAGAAGGGA
AGGGGCAAGC CTCGCGTTAC CGCTCGCGTC GAAGGTGGCT CTTTTAGTAC CTTCAAGGCG
ACAGGCGGAG TACATGGCGG AAATGACCTT GTTAATTACA GCCTGACCGG GACTCGCCTT
GAAAGCGCTG GCATCTCAGC GGCTGATTCT CGCCGGGGCA ACCCGGAAAA AGATGGTGAT
CGGAATACAA CCCTCGCGGG GCGATTCGGG CTAACGCCTA CGCCCATTTT TTCCCTTGAT
ACTACCTTGC GCTATAACGG TAACCATACT GACATTGATG GCTACAGAGG TGTCGTGCCC
ATAGACGATC CTAATTCGAC TCTGGATAGC CAACAGTTGT TTCTCCGGGG TCAAGGACAT
CTTACTTTGT TTGATAATCT ATGGGAACAA ATACTTGGGG TTTCTTTTAC CCACCATGAT
AGGGAAAATC AAAATCGGCC CGATCCTCAG AACCCTTTTC CTTTCCCAGG TTCTTTTAAG
GGGGAGAAAA TCCAAGTGGA TTGGCAAAAT AATTTGCAGT TCTCTAAGAA GCATACCCTA
ACCTTTGGAT TCGCCTGGGA AGAGGCCAGC ATGGAGGCCC AATCGCCGGG TTCAAACTTG
CCCCGGCAGA GCGTTGACAC CGAGGGATAC TACTTGCAAG CTCAATTGAG CTTTTGGGAT
AAGCTGTTTC TCACTGGCGG GGTGCGCTTG ACTCATCATA GTATTTTTGG CTCCAAAATC
ACTGAACGGG TAACCGCCGC CCTGGTGCTT GACACGCTGG GGCTCACGCT CAGAAGCAGC
TATGGCACTG GGTTTAAAGC CCCTACTTTA TCTCAGTTAT TCGATGATCG CTTTAATGCC
CCTCAGGATA ACCGCTTCAA TACTCCTCAG CTTAAATTCA ACAATCGGGA TTTAAAGCCT
GAAAAGAGCA GCTCCTGGGA TATTGGGGTA GAGCAATCAT TTTGGGACGA GCAAGGGGCG
GTTGGGGTGA CCTACTTTGA CAATGAATTG ACCGATTTAA TTCAGTTTAG CCAGGTAGCT
GCTGATAAGT TCCAGCTTAT TAATATCGAT GCGGCCAAAA TTAAAGGCTG GGAAGTCTTT
ATGAATTTAA CGCCCCTTAA GGGGCTGACT TTGCGGGGAA ATTATACCCA GATGCATACT
CAAGATGAGA AAACCGGTCA GCCCTTGGTG CGGCGTCCGG AACACAAAGC AGGCTTTAAC
GCTAATTACC GCTTTTTGAG TAAGGGTAAC CTCCATCTTC AGGTGGTTTA TGTGGGGCAT
CGGCAAGATG TAGGGGGTAT CCCTCTGCCT AGCTATACAG TAGTTAACGC TGCTATTTCC
TATGAGGTCA CTAACTATTT TCAATTATTT GCCCGGGCGA ATAATCTGCT GGATAAACAA
TATCAGGAAG TGTTTGGATT CGGCACACCA GGCATCTCCG GCTTTGGTGG TATCGAGTTT
TCTTTTTGA
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| Protein sequence | MKIFSAFGLV GWVVFGSFVY AGEQQTPKTL EPIVVTATRT PTPVQDVGSD MSVITAEDLV
QRQRMPVLEV LRGLPGVDVV QSGGLGQQTS VFLRGANANH TLVLIDGVEA NDPSNPSGSF
DFANLLTDNI ERIEILRGPQ STLYGSDVIG GVINIITKKG RGKPRVTARV EGGSFSTFKA
TGGVHGGNDL VNYSLTGTRL ESAGISAADS RRGNPEKDGD RNTTLAGRFG LTPTPIFSLD
TTLRYNGNHT DIDGYRGVVP IDDPNSTLDS QQLFLRGQGH LTLFDNLWEQ ILGVSFTHHD
RENQNRPDPQ NPFPFPGSFK GEKIQVDWQN NLQFSKKHTL TFGFAWEEAS MEAQSPGSNL
PRQSVDTEGY YLQAQLSFWD KLFLTGGVRL THHSIFGSKI TERVTAALVL DTLGLTLRSS
YGTGFKAPTL SQLFDDRFNA PQDNRFNTPQ LKFNNRDLKP EKSSSWDIGV EQSFWDEQGA
VGVTYFDNEL TDLIQFSQVA ADKFQLINID AAKIKGWEVF MNLTPLKGLT LRGNYTQMHT
QDEKTGQPLV RRPEHKAGFN ANYRFLSKGN LHLQVVYVGH RQDVGGIPLP SYTVVNAAIS
YEVTNYFQLF ARANNLLDKQ YQEVFGFGTP GISGFGGIEF SF
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