Gene Noc_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1908 
Symbol 
ID3705540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2183538 
End bp2184002 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content50% 
IMG OID637738386 
Producthypothetical protein 
Protein accessionYP_343902 
Protein GI77165377 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCA CCAACCACCA CTTACCATCT ACACCAGGAT TGTTTCGTCG CCTAGGAGCA 
ATTTTCTACG ACAGTCTGCT GCTTATAGCG ACCTGGTTTT TGTTCACTAT TTTTGCCTTG
CCTCTCACTG CGGGAGAAGC TATTCCAGCA GGTAATATAC TCTATCGCCT CTACCTGCTA
TTGATTGCCC TGGCCTTTTT TGGCGGCTTT TGGACTCATG GAGGGCAAAC TCTGGGAATG
CGCGCCTGGC GTATCAAGGT GCAACAACCC AATGGTCAAC TTATTACCTG GCGCCAAGTC
CTGCTTCGCT TCGGATCTGC TTTCCTTTCT TGGCTTCCCC TGGGGGCGGG GTTTTGGTGG
GTATTCATCG ATAAAGAAGG CCAAGCCTGG CATGACCGCC TTTCAATCAC TACACTTGTC
CTGGTGCCCA AAAAAACGAA AGTTAATAAA TCCGGCGCAG CATAA
 
Protein sequence
MKATNHHLPS TPGLFRRLGA IFYDSLLLIA TWFLFTIFAL PLTAGEAIPA GNILYRLYLL 
LIALAFFGGF WTHGGQTLGM RAWRIKVQQP NGQLITWRQV LLRFGSAFLS WLPLGAGFWW
VFIDKEGQAW HDRLSITTLV LVPKKTKVNK SGAA