Gene Noc_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1906 
Symbol 
ID3705538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2179032 
End bp2179580 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content51% 
IMG OID637738384 
ProductSmr protein/MutS2-like 
Protein accessionYP_343900 
Protein GI77165375 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.318936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCA AAAAAAAACC GGTTTCCACT CACGATCGGG AACTTTTTCG AGAAGCAGTA 
AAGGATGTAC TGCCATTAAA TCAGGATAAA ATCATGCCCT TTCAGCGGTA CCTCGCCCCC
ATACCTCAGC AGCGGAAACG GGATGAAGTT CGCGTGCTTC AGGACATGAT GTCGGATACC
TTTGAAGCAG TTGAATTGGA AACCGGGGAA GAACTTCTCT ACCTCCGGCC AGGAGTGCAA
AAGCGGCTGC TCCGCCAACT ACGCCAAGGA AAATTCAGTA TCGGCGCCGA ACTTGACCTC
CATGGTATGA ATGTCCCCAT GGCCCGACAG GCGCTTGCCG GATTCCTAAA AGAGTGCGAG
AAAAACGGCA TTCGCTGTAT CCGCATCATT CATGGAAAAG GACGGGGATC CTACCATAAA
GAACCCATCC TTAAAGGAAA AGTAAACACC TGGCTCCAAC AAAAAGACGA AATACTGGCC
TTTTGCTCAG CCCGCTCCAC TGACGGGGGC ACGGGAGCGA TTTATGTCCT ACTTAAGCGG
CGTCGATAG
 
Protein sequence
MSRKKKPVST HDRELFREAV KDVLPLNQDK IMPFQRYLAP IPQQRKRDEV RVLQDMMSDT 
FEAVELETGE ELLYLRPGVQ KRLLRQLRQG KFSIGAELDL HGMNVPMARQ ALAGFLKECE
KNGIRCIRII HGKGRGSYHK EPILKGKVNT WLQQKDEILA FCSARSTDGG TGAIYVLLKR
RR