Gene Noc_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1905 
Symbol 
ID3705499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2176947 
End bp2178257 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content46% 
IMG OID637738383 
Producthypothetical protein 
Protein accessionYP_343899 
Protein GI77165374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.229802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACA AACTAAATAG GCTGCAAGTG TTTTCCTTCG CATTGGTAAT CGTTTCTCTT 
ATTCCGGCCA TAGCGGTTAC TGCGTGTGCT AAGTCTGCAG ATCAAAAGCA GGCAGCCTCT
ATCGATCAAA AACAGGCGGC ACCCGCTCTT GCATTTGACC AAGGACAGCC GTTATACACC
ATAGATATTG TCTCTGCGGC AGGGGTGGAA ATCCTGGATC ATATTGTCCA AGCCCGCGCG
GATATACATA ATGGCGATAT CAAGCAGGCG AAAGAAGAGC TTAGCAACGC CCATAGGCAT
TTTGAAGCTA TTAGGGCCAT TGAACCCACA ACTCAAATCA AAAAGCATAT TTCAATCGTA
GCAAAATATT TAGGCTATGG AGAGAAAGAG GAGATTCAGC CTTACTTTAT TCCTCTTTAC
GCTAGCCTTG ACACCATTGC CGATTTAGTG CCCATAAGCT CCGCCAAAGC CCATATTAAA
AAGGCGGAAG ATAATATGAA TAAGAACCAG CGGGAAGCTG CCGCACAGGA ATTGAGTGAA
GCTAAACAGT CCCTAATTTA TACTGAGATT GACTTGCCAT TGGCTGCGAC CGAAGGTAAT
GTGACCATGG CTCAGCAAGC CTTAGCCGAG AACAAACCAG AAATTGCCGA TAAGGCATTA
AAGGCAGCTG AACAGAGCGT CATGCTTTTT AGCTTTGGAA GCACTGAGAC GGCCACCTCC
GCGCGCAACA ACCTTTCGAT GGCCAACCAC AACTATACTG CCGGGAAGTA CCAGGCTGCG
AAGCTGGATC TAGCCGCTGC CATCAAGAAT CTGGAAGAAG CGACCGCAAG TAATAACTAC
CTCACCGCAA ATTTAGCCGA TGGGTTACTG CAAGAAGCCA AGGCGATTGA ACCAGCTATT
GAGAAAAAAT CCAATGAAAC CACAACGCGT CTACAGGCCC TTTTAGAGCA CACCAATGCC
TTATCTGAAC ATGAACTTGA GTTAATGGGA ATCGGTTGGA ACGATCTTCC TAAAACTATC
GAACAAACCC GCCAAGCGCT TGCCAATGCC AAATTATATC TGAATTATGC GGAAATTGAT
CAACTCACTC TCCACGACCA GGATAAAACC CAAGAAGACT TAAAACAGGC CCAATCCTAT
CTCCAGAAAG GTGCTGAAAA TGAAACGGCC CATAAAGGCG TCATCGAAAA TATAGAAAAG
AAAGTACAGG CCCTTCAAAA GACGGTAGGG GAGAAACGTG ACGAAAATGC CAGCCAGCAA
TATGCGGATA CTCTAGCCCA GCTACGGCTT ATTATTAACA ACAAGCTCTG A
 
Protein sequence
MQNKLNRLQV FSFALVIVSL IPAIAVTACA KSADQKQAAS IDQKQAAPAL AFDQGQPLYT 
IDIVSAAGVE ILDHIVQARA DIHNGDIKQA KEELSNAHRH FEAIRAIEPT TQIKKHISIV
AKYLGYGEKE EIQPYFIPLY ASLDTIADLV PISSAKAHIK KAEDNMNKNQ REAAAQELSE
AKQSLIYTEI DLPLAATEGN VTMAQQALAE NKPEIADKAL KAAEQSVMLF SFGSTETATS
ARNNLSMANH NYTAGKYQAA KLDLAAAIKN LEEATASNNY LTANLADGLL QEAKAIEPAI
EKKSNETTTR LQALLEHTNA LSEHELELMG IGWNDLPKTI EQTRQALANA KLYLNYAEID
QLTLHDQDKT QEDLKQAQSY LQKGAENETA HKGVIENIEK KVQALQKTVG EKRDENASQQ
YADTLAQLRL IINNKL