Gene Noc_1903 details

Gene Information

• Locus tag: Noc_1903
• ID: 3705497
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 2174246
• End bp: 2176135
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637738381
• Product: peptidase M41, FtsH
• Protein accession: YP_343897
• Protein GI: 77165372
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.89968
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCAACC AAAAACCAGA TATCGAAATC AATAAACCTG CAAAGATACC TTTTTGGCGA 
AGACCTTGGT TTTCATTCCT GCTCTACGGG CTATTTGTCC TCGTGTCCTA TTCAACCTTC 
AAAACGGAGC AGGAAGAAAT CCCTTATAGT CAATTTCTAA GATATGTTCA AGCTGGTCAG 
GTTCAACAAG CCGTCATCAG GAAGGACATG ATCGAAGGAA CCTTAAAGCC CGAGAAAAAA 
CACAAAGGTA AAAAGACGGA AAAACCCCGG CAATTCGTCA CGGTACCTCT CTGGGATGAC 
CCACTTGCGG TAATGTTGGA AAAACATGGA GTGAACTATG TTGTCAGGAC CGGTGGCGAT 
TGGCTCTCAA ATCTGCTATT TAACTGGATT CTTCCCTTTG CGGTCATCTC TTTTTTGTGG 
ATATGGATCG GGCGTAAGGT AAACAGGGGC GGAAGCTTTT TAAGCTTAGG GGGCAACCGC 
GTCCGTATCC ACCCGAATAC CCTGCCCAAG GTCACCTTCG ACGATGTCGC CGGGGTTGAA 
GAAGCTAAAG AGGAACTCCG AGAGATCATT GTCTTTCTGA GAGATCCCAG CCTTATTCAG 
GATTTAGGAG GGCGCATGCC CAAAGGAGTT CTTTTGGCCG GCCCTCCGGG AACTGGCAAG 
ACTTTGCTGG CCCGGGCTGT TGCTGGGGAA GCCCGGGTTC CTTTCTTTAA TATCAGTGGC 
TCCGAGTTTA TCGAACTATT TGTGGGTGTT GGCGCAGCAC GCGCACGGGA TTTGTTTGAG 
CAGGCGCGGA AAAAAGCACC CTGTATTATT TTCATTGATG AGTTGGATGC AATTGGACGT 
ACTCGCGCCG GAGCGGTATC CATGGGGGGG CATGATGAAC GGGAGCAAAC CTTGAACCAG 
TTGTTGGTGG AAATGGACGG CTTTGACCCT TCCGTGGGGG TAGTGGTAAT GGCGGCGACC 
AACCGGGCGG AGATTCTTGA CAAAGCTTTA TTACGCGCCG GGCGCTTCGA CCGCCGGGTG 
TTGGTAGACA AACCCGACTT GGAAGGACGC ATCGAAATTC TCAAGATCCA TGTGCGGGCG 
CTTAAGCTTG GGCAAGACGT GGATCTCAAG GTGGTTGCCC AGCGTACGCC TGGATTTGTC 
GGCGCTGATT TAGCCAATAT CGCCAATGAA GCCGCCCTGC ATGGAGTCCG AATGGGTCAT 
GAAGCCATTA CTCTGGGTGA CTTTGAAGCG GCTGTTGACC GGGTAATCGC GGGACCGGAG 
AAAAAGCACC AAATTCTGAG CCCCGAGGAA AAACGCCGGG TAGCCTACCA TGAATCCGGC 
CACACTTTGG TAGCGGAGAC GGTTCCCACA GGGGAACCCG TACATAAGGT ATCCATTATT 
CCCCGGGGTG GCGGCGCTTT GGGATACACT TTGCAACTTC CGGTAAAAGA GAAATTTCTG 
GCCAACGCTT CCGAACTCAA GGACCAACTG GCCATCCTGT TGGGGGGGCG CTCGGCGGAA 
GAAATTGTCT ATGGCGATGT CTCCAGCGGC GCACAAAATG ATCTGGAAAA AGCTACTGAA 
ATTGCCCACG GCATGGTTTG TCAGTTAGGA ATGAACGAAA AACTTGGTCC CTTAACTTAC 
GGCAAACGCC ACCAATCCCT TTATTTGGGC GTAGATTATG GCGAGGAGAA AAATTACAGT 
GAAGCGACCG CCCAGGTTAT CGATGCGGAA GTTAAGAAGC TCATAGAAGA AGCCCATCAA 
CGGGCACGGG AAATACTCAC CGAGCAGCGG CAAATCCTGG AAATCCTGGC AGAACTTTTA 
GAAGAAAAAG AAATTATCAG TGGAAATGAA GTTAAACAGG TCATCGACAA CGCCCGGGGG 
GCTCTGGACA AAACGCCATT CCGGAAATAG 

 

Protein sequence

MANQKPDIEI NKPAKIPFWR RPWFSFLLYG LFVLVSYSTF KTEQEEIPYS QFLRYVQAGQ 
VQQAVIRKDM IEGTLKPEKK HKGKKTEKPR QFVTVPLWDD PLAVMLEKHG VNYVVRTGGD 
WLSNLLFNWI LPFAVISFLW IWIGRKVNRG GSFLSLGGNR VRIHPNTLPK VTFDDVAGVE 
EAKEELREII VFLRDPSLIQ DLGGRMPKGV LLAGPPGTGK TLLARAVAGE ARVPFFNISG 
SEFIELFVGV GAARARDLFE QARKKAPCII FIDELDAIGR TRAGAVSMGG HDEREQTLNQ 
LLVEMDGFDP SVGVVVMAAT NRAEILDKAL LRAGRFDRRV LVDKPDLEGR IEILKIHVRA 
LKLGQDVDLK VVAQRTPGFV GADLANIANE AALHGVRMGH EAITLGDFEA AVDRVIAGPE 
KKHQILSPEE KRRVAYHESG HTLVAETVPT GEPVHKVSII PRGGGALGYT LQLPVKEKFL 
ANASELKDQL AILLGGRSAE EIVYGDVSSG AQNDLEKATE IAHGMVCQLG MNEKLGPLTY 
GKRHQSLYLG VDYGEEKNYS EATAQVIDAE VKKLIEEAHQ RAREILTEQR QILEILAELL 
EEKEIISGNE VKQVIDNARG ALDKTPFRK