Gene Noc_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1902 
Symbol 
ID3705496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2172920 
End bp2173762 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content51% 
IMG OID637738380 
Productputative cyclase 
Protein accessionYP_343896 
Protein GI77165371 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATA TTTTTCTTGC CATGCTATGG ATGATAGGGG CGTTGGGATG CCAGATGGAG 
GCACCCATTC AGGCGCTTAC GAAACCCGAA CGCATTGAAG GTGTACTGAC TTCAATGGCA
CGAATCTCTG GTAGGTTTAT TGATCTAACA CATACCTATG ATGATATGAC AGTGTATTGG
CCAACTGCCG AAGGCTTCCA ACTTCGGCAA GATGCGGTTG GCCTAACCGA GAAGGGTTAC
TATTATGCGG CAAATACAAT CACCACTGCT GAGCATGGTG GTACTCATAT CGATGCCCCG
ATTCACTTTT TCGAGAATGG CCGCACGGTG GATAAAATTC CCCTGGAGCA ACTTATTGCC
GAGGCCGTGG TTGTTGATGT ACAGGCGAGA TGCAAAGATA ACCCCGATTA TCAAATCGGC
GTTTCCGATT TGCTGGCATG GGAAGAAAAG CACGGGCGGC GGTTAGTCAA TGTGATCCTA
TTATTGCGAA CCGGGCATGC TAGATTTTGG CCTGATCGAG CGAAGTATTT GGGAACTACG
GCAATGGGTG AGGAAGCGGT TAGTCAGTTG CATTTCCCCG GCCTCGATCC AGAAGCAGCG
AAGTGGCTGG CCGAGCAGCG AGCCATCCTT GCCATCGGTA TTGACACGCC TAGCATCGAC
TTTGGTCAGT CGACTCACTT TCAAAGCCAT GTGAAGCTTT TCGAGCATAA CATTCCCGCT
TTGGAGAATG TCGATATTCC GCCCGATTTG CCTGAGAAAG ACTTTACGCT GCTCGCGTTG
CCGATGAAGA TCGGAGGCGG CAGTGGCGGC CCGACGCGCA TTGTAGCGGT TGTGCCAGAT
TAA
 
Protein sequence
MRHIFLAMLW MIGALGCQME APIQALTKPE RIEGVLTSMA RISGRFIDLT HTYDDMTVYW 
PTAEGFQLRQ DAVGLTEKGY YYAANTITTA EHGGTHIDAP IHFFENGRTV DKIPLEQLIA
EAVVVDVQAR CKDNPDYQIG VSDLLAWEEK HGRRLVNVIL LLRTGHARFW PDRAKYLGTT
AMGEEAVSQL HFPGLDPEAA KWLAEQRAIL AIGIDTPSID FGQSTHFQSH VKLFEHNIPA
LENVDIPPDL PEKDFTLLAL PMKIGGGSGG PTRIVAVVPD