Gene Noc_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1887 
Symbol 
ID3705461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2151989 
End bp2152276 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content53% 
IMG OID637738366 
Producthypothetical protein 
Protein accessionYP_343883 
Protein GI77165358 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCCA ATTCCCCGCT ACAATTCGGG CCGTGTTCAA TGCCGGTATC GAACACCCGC 
TTTAACAGGC GCGCCCAACG GATGCCGCAG AATGTGGCGC CTCCTCATTC GCATCGCTTG
GGTTGTTTTT GCATTCCACC AAAATTATTC GGTGTCACGC AACCGTGTGT CTCCGATCTC
ATGCGGGGCA AAATCGAATT GTTTAGTCTG GCCTCCTTGG CCAACATGGC GACGGTAGCC
GGTTTGCATG TCGAGTTACA TGGGCATGAG CCGGAAACTG CACCATAA
 
Protein sequence
MISNSPLQFG PCSMPVSNTR FNRRAQRMPQ NVAPPHSHRL GCFCIPPKLF GVTQPCVSDL 
MRGKIELFSL ASLANMATVA GLHVELHGHE PETAP