Gene Noc_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1882 
Symbol 
ID3705456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2143103 
End bp2143516 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content51% 
IMG OID637738361 
Productputative transposase 
Protein accessionYP_343878 
Protein GI77165353 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGTA CACACAGATA CGCGCGGGTT GGACAGCGCT GCTACGGACT GTGTGACTGG 
CACGCCAAAG GCCGGACAAA TGCTATCGGC GCTTTGATTG GCAAGGCTTT GCTCACAGTC
GGGTTATTCA CAGCAAACAT TACGGCAAAC ATTTTTACGG CATGGGTAAA ACAGGATTTG
TTGCCGCAAT TGCCGGAAAA CGCCGTCATC GTCATGGATA ACGCCACGTT CCACAAACGG
CTGGACACAC AAGAGAGTCT CCGAAAGGCC GGCCATACCC TGCTTTTCCT GCCGCCTTAC
TTTGCAGAGC TCAACCCCAT CGAACAAAAA TGGGCGCACA TCAAAGCCAT CAGAAAACCA
CTCTCCTGCT CTATCGATGA CCTCTTCAAA ATTGAATCAT TTTATGTGAC GTAG
 
Protein sequence
MPRTHRYARV GQRCYGLCDW HAKGRTNAIG ALIGKALLTV GLFTANITAN IFTAWVKQDL 
LPQLPENAVI VMDNATFHKR LDTQESLRKA GHTLLFLPPY FAELNPIEQK WAHIKAIRKP
LSCSIDDLFK IESFYVT