Gene Noc_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1868 
Symbol 
ID3705132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2124742 
End bp2125392 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID637738347 
Producthypothetical protein 
Protein accessionYP_343864 
Protein GI77165339 
COG category[S] Function unknown 
COG ID[COG3501] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATCA CACTCTATGA ATCTGGCGAA GAAAGAAAGA CAAATAAAGA AAAAACTAGC 
GTTGTAACGG GGACCGTGAT TAATAATTGC GATCTCATAA AACAAGGAAA AATTTTGGTT 
AGAATACCGT CTCTTGATCA GGAACTCTGG GCGCGGTTAA CAGCGCCTGG AGCTAGCTCA 
GGCGCTGGTT TATTCTATGT TCCTAGGCCG GACGATGAAG TGCTGGTTGT GCTGAGCGGT 
GATGAGCCTG TAGATGCCTA TATCATTGGC GGGCTTTGGA ACACCCAAGA TAGTCCACCG 
GTATCAAATC CTCTGGAGGC GTCGACTAAA CGGGTTATTA AGACAGGGTT GGCAGGAGGC 
GTTGGACATG AAGTGGAGTT CGACGACGGA CCTGGTCAAT CCATTTCTAT AACCACTTCC 
ACCCAACAGA AAATTATCAT TGATCCGTTC AAAATTGAAC TGCGCAATAC GGCTGGCACA 
CTCAAGATTA CGCTTGATAA CAAAACACAG ACAATTTCTA TTGCTGCTGC AGCCAGCCTC 
GAACTCGCTG CTGTAGGAAA TATTAAGCTC AAAGCCGCAA ATATCGAAAT CGGCGATATC 
GTGAAGACAG CTAAGACCTC TATTAACGGG AAGATGGTCT CGATCAACTA A
 
Protein sequence
MPITLYESGE ERKTNKEKTS VVTGTVINNC DLIKQGKILV RIPSLDQELW ARLTAPGASS 
GAGLFYVPRP DDEVLVVLSG DEPVDAYIIG GLWNTQDSPP VSNPLEASTK RVIKTGLAGG 
VGHEVEFDDG PGQSISITTS TQQKIIIDPF KIELRNTAGT LKITLDNKTQ TISIAAAASL 
ELAAVGNIKL KAANIEIGDI VKTAKTSING KMVSIN