Gene Noc_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1842 
Symbol 
ID3705086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2090377 
End bp2091126 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content39% 
IMG OID637738322 
Producthypothetical protein 
Protein accessionYP_343839 
Protein GI77165314 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGTT TATTTCAAAA AATTCATCAT ATCAGCCGTA AAAAACCATT AATCACCTTC 
TCTGTGGGGA TTATATTAAT TTTTATAGGC TTATACTTTT TTTGGCCTTC CCTTCATGAT
TCAATCAATC GTTTTTTTAA TATCTTGTTC AGTGGTGATC GGGAAAAACT ACATGACTTT
GTAGAACAGT TTGGATTCTG GGGACCTATT ATTATCATTT TATCCATGGT GGCCCAAATG
TTTTTGGTGG TTATCCCGTC GGTAGTTATT TTTGTTGTTT CGATCCTTGC TTATGGCTCT
TTTTGGGGTG GAACCGTGGC TTTAATCGCA GTTTTAGTGG CTTCTACCGT AGGCTATTTT
GTCGGCCGTT GGTTGGGTCC CATTACAGTG GATAAATTAA TTGGATTGAA AACCCGTCAC
AAGATAGAAG GATATGTAGA AAGGTACGGT TTCTGGACAG TTATTGTTAT TCGATTTTCT
CCTTTTCTAT CCAATGATGC TATCAGTTTC GTGGGTGGGC TGTTACGGAT GAATTATTGG
CGGTTTATGG CCGCAACCTT TATTGGTATT TTACCGCTTA TTGTTCTTCT GGCCTATTTA
GGGGAAACAA ACGAGCGGTT ACGGACAGGA ATGTTTTGGG TTTCAATAAT AAGCTTGATC
GTTTTTATAG CCTATATCAT TTATGACCAC CGTAGAGGAG ATGATAGTTC CACGCGGGTA
AAGCAACGGA ATTCGGTACA AAAAAGGTAA
 
Protein sequence
MNSLFQKIHH ISRKKPLITF SVGIILIFIG LYFFWPSLHD SINRFFNILF SGDREKLHDF 
VEQFGFWGPI IIILSMVAQM FLVVIPSVVI FVVSILAYGS FWGGTVALIA VLVASTVGYF
VGRWLGPITV DKLIGLKTRH KIEGYVERYG FWTVIVIRFS PFLSNDAISF VGGLLRMNYW
RFMAATFIGI LPLIVLLAYL GETNERLRTG MFWVSIISLI VFIAYIIYDH RRGDDSSTRV
KQRNSVQKR