Gene Noc_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1840 
Symbol 
ID3705084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2088007 
End bp2089368 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content53% 
IMG OID637738321 
Productdivalent cation transporter 
Protein accessionYP_343838 
Protein GI77165313 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATT CCAAAGATAA CCGCCAACTC GCCGCTGACC TGGCAGAGCT TTTAGACGCT 
GGCTATCTGG CTCGAGCAAC GACTCGCCTA GAGACCAGCG ACCCCCCCAC CATCGCCAAT
ATCCTGGAAG CCTTTCCCTG GGAGAAGCGG CTTCAAATTT GGCAGCTGCT TACCCCCCAA
ACTAAAGGCG CGGTACTCAT CGAATTAAAT GAAGAAGTCC AGGATGGACT CATTGCAGAA
TCGCTCCCAG AGAATTTGGT TAAAACAGTC TCTGGACTCG ATATAGACGA TTTGGCTGAT
CTCTATGAGC GCTTACCGGA AAAAGTCCGG GCGGCCGTTC TGCAAGCCAT GGATGAGCGG
CGGCGGCAAC GCTTTGAGGC CGTGCGCCGC TATCCCGATG ACACTGCTGG CGGTCTGATG
GACGTGGATG CAGTAGCGGT CCGAGGCGAT GCCACCCTCG ATACGGTGCT GCGCTATTTG
CGCAGAATCC GGCGCCAACA GGGAGAACTT CCTGAGCATA TGGATGCAAT CATTGTGGTT
GACCGCGCTT CCCGCTATAT AGGCATGCTT TCCCTCAGCG ATCTAGTCTC CTTGGAAGAA
AACCGCACCG TCTCAGAGGT CATGCGCGCC GAGCTCAGTC CTATTCCCGC TCTGGCATCC
GCGAAAAGAG TGGCGCGGTT ATTTGAGGAT TACGATCTGC TCTCCGCCCC CGTAGTGGAT
GAGGATAACA AATTAATTGG TCGCATTACC GTGGATGATG TGGTGGATGT GATCCGTGAG
GAAGCCGACC GCGCGCTAAT GAGCGCAGCG GGACTGGAAG AGGAAAGCGA TATCTTCGCG
CCCATCGTCA CGAGCGCTAA ACGGCGGGCA GTCTGGCTAG GCATCAATTT GATCAATGCC
TTCCTCGCTG CCTGGGTAAT TGAGCAATTT GAAGGTTCCA TTGAACGACT CGTGGTGCTG
GCCGTACTGA TGCCCATTGT TGCCAGTATG GGCGGTATTG CCGGTACCCA AACCTTGACC
CTGGTCATTC GAGGCATCGC GCTGGATCAA ATAGGGCCCG GTAATATACG CAGAATATTG
GGAAAAGAAC TGGGGGTGAT TACAATCAAT GCCCTATTGT TTGCTTTCAT GATAGCCACT
ACGATGATGA TTTGGCATCA GGATAGCAAT TTGGCCTTGG TATTTTCCTC AGCTTTGGCT
ATTAATCTGC TGAACGGAGC CATGGCCGGG GCCGTAATAC CCTTTGTCCT GTACAAACTA
GGCATTGACC CGGCTCTCGC TGGTGGGGTA GTACTCATGG CAACCACGGA TGCCCTTGGT
TTTTTTACTT TTCTCGGTCT AGCTACTTTT TTTCTCCTGT AG
 
Protein sequence
MFNSKDNRQL AADLAELLDA GYLARATTRL ETSDPPTIAN ILEAFPWEKR LQIWQLLTPQ 
TKGAVLIELN EEVQDGLIAE SLPENLVKTV SGLDIDDLAD LYERLPEKVR AAVLQAMDER
RRQRFEAVRR YPDDTAGGLM DVDAVAVRGD ATLDTVLRYL RRIRRQQGEL PEHMDAIIVV
DRASRYIGML SLSDLVSLEE NRTVSEVMRA ELSPIPALAS AKRVARLFED YDLLSAPVVD
EDNKLIGRIT VDDVVDVIRE EADRALMSAA GLEEESDIFA PIVTSAKRRA VWLGINLINA
FLAAWVIEQF EGSIERLVVL AVLMPIVASM GGIAGTQTLT LVIRGIALDQ IGPGNIRRIL
GKELGVITIN ALLFAFMIAT TMMIWHQDSN LALVFSSALA INLLNGAMAG AVIPFVLYKL
GIDPALAGGV VLMATTDALG FFTFLGLATF FLL