Gene Noc_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1834 
Symbol 
ID3705078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2083338 
End bp2084222 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content49% 
IMG OID637738315 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_343832 
Protein GI77165307 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGGC AAAAAAAAAT AAACCCTTTT CAAGTCTTTC TTACCGTTTG GCAATTGGGG 
CGTCAGCGCC CCCTTGTTTT GCTACTACTG GTGCTGACAA GCGGATTCTG GTATGGCTAC
GAACTGTATA TTGCCCGCCC CGGAATGGTA TACATGGGGG TTCCCAAAGC TCAAAATTGG
AAACAGCCCC ATACCTGGAC CCGAATTTTC CGTAATGATG GCTTTATGGT GGGCTATTCG
GACCTGCGGG GTAACCCCCT ATGGGTCAGT TACAAGGTCG AAACCATACC CGATAACGCG
CCTTACTATA AACGCCCTCA GCGGTTCAGC GCCGACTGGC GCAATCTAAC CCATATCGCC
CACGATGATT ACCGCCACAG TGGCTACGAC CGGGGCCACA TGGCGCCCAA CTATGCGATT
AGCCGGCTTT ATGGAGAACA GGCTCAGCTG GATACTTTTC TCATGACCAA TATCACTCCG
CAAAAACCCA AATTGAATCA AAAATTGTGG CAGCGCCTAG AAGAAGTAGA AATTAATCAT
TTCACCAAGC GGTTCAAAAC GATTTGGGTA TTCACCGGTC CAATTTTCGA TCCTAATATC
GAGCGGCTTA AATCCTCATA CCGGGTGGAA ATACCCGATG CCTTTTACAA AATCTATTTC
GCCCCCTCGC ATGAGAAAAT GCTTGCCTTT ATCGTGAAGC AAGAAGGGGT GCGGGGTAAA
GAGCCCCTAG ATAAATTTCT GGTCAGTGTT GATGACGTGG AAAAGCAAAC CGGCTTTGAT
TTTTTCCATG AACTAGAAGA CACTTTGGAG GAGCAATTGG AATCCTCCAC CGAACCGGAC
CCCTGGCAAC TGAAGGAGGT CGCCCGGTTA CCCGCCCGCT ATTAA
 
Protein sequence
MARQKKINPF QVFLTVWQLG RQRPLVLLLL VLTSGFWYGY ELYIARPGMV YMGVPKAQNW 
KQPHTWTRIF RNDGFMVGYS DLRGNPLWVS YKVETIPDNA PYYKRPQRFS ADWRNLTHIA
HDDYRHSGYD RGHMAPNYAI SRLYGEQAQL DTFLMTNITP QKPKLNQKLW QRLEEVEINH
FTKRFKTIWV FTGPIFDPNI ERLKSSYRVE IPDAFYKIYF APSHEKMLAF IVKQEGVRGK
EPLDKFLVSV DDVEKQTGFD FFHELEDTLE EQLESSTEPD PWQLKEVARL PARY