Gene Noc_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1815 
Symbol 
ID3705255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2056438 
End bp2057625 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content60% 
IMG OID637738298 
Producthypothetical protein 
Protein accessionYP_343815 
Protein GI77165290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000414725 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAT ACATCACGCC CCCCGTCTCG CCCACCGCCC TTGCCTTGCC TGGTGCTTGT 
ACCGGAGCCC TACAAAGCTT GCTCGTGATA GTGCTACCGA TTATCCTCGC CCTTACGGGG
CTAGAGATTG GGCAGCTAAG CCCGATATTG GGGATCGCGG CCCTGGGATT CTTGGTGGGC
GGCTACGCTT GGCCACGGCG GGTAATACCG GGGCACCGTC GTCGGTTGCT AGAACGGCTC
CTGCTCGCTG CTACTGTCAG CCAGGTGGTG TTTATTGCTG CCTTATCCGC TAGTGCGCTA
GAGCTGATCG GGACGGCAAT GTTAGCAGCC CTATTGTTCG TTGCCCGGTT CGCCTACGGG
CTTACCGCTT CAGGCGTGTT TCCCACAGCC CAGGCATGGG CGGCCAGTGA ATACCCTGGG
CATGCTCGTC ATGGCGCCCT AACACGCATG AGCGCTACCG TGCATACTGG TCGGGTGCTC
ATTCCCCTAG CGGCGGCGGC ACTAGCTATG TACTGGCCGG AGGGAATACT TACCTTGCTG
GTGATTCTGC CCTTTATCGC TCGGCTGTTG TTACCCCATG AACGGGCTTC CCAAGAGGAT
GTGCCACTCA CTGCACCGAC AAATCGATGG CCGGAGGCAA CGATTGCCCT GCCGATAGTC
CTCATTCACA TGAGCGTGGG GCTTGCGGAA TTTATCATTG GCCCCTATTT GGCCGCCGAG
TGGAATATCG CCCTTAGCCA TGCACCGGCG TATACAGCCC TGCTCCTTGC AGGTATAGCT
GCTTGCATGG TGCTTGCTCA GCTCGTCAGC CTCCATTACC GCCTCAATCC CTGTTCTCTA
CTGGTATGGG CTCCGGTGGG CATGGCTCTG GGCACGGCCC TGGCCGCTGT CTATCCGCTG
GCCCTGCCTG CCGGTTTGGC ATTGGTGGCA GTTGCGCTTG CGCTAATATT GCCTGCCTCG
GCTGCTGGCG CTGCCGCTAA CCGCAGCCTG CATACTCAGC CACAGGCGGG CGCCGATCTC
TACACCGCCC GCATCCTTGG GCATTTGCTT GGCGTCACGG CAGCAGGTCC CCTGTTTGAA
GTCGCCACCC ACCTGCCCCT TGTTACCGCA GCGGTCCTCG CGCTTATGGC TATTCCAGCC
ACGGCGGGGC TGCGGCGAGC CTTGACTACC CAAGCTATCT ATAAATAA
 
Protein sequence
MSQYITPPVS PTALALPGAC TGALQSLLVI VLPIILALTG LEIGQLSPIL GIAALGFLVG 
GYAWPRRVIP GHRRRLLERL LLAATVSQVV FIAALSASAL ELIGTAMLAA LLFVARFAYG
LTASGVFPTA QAWAASEYPG HARHGALTRM SATVHTGRVL IPLAAAALAM YWPEGILTLL
VILPFIARLL LPHERASQED VPLTAPTNRW PEATIALPIV LIHMSVGLAE FIIGPYLAAE
WNIALSHAPA YTALLLAGIA ACMVLAQLVS LHYRLNPCSL LVWAPVGMAL GTALAAVYPL
ALPAGLALVA VALALILPAS AAGAAANRSL HTQPQAGADL YTARILGHLL GVTAAGPLFE
VATHLPLVTA AVLALMAIPA TAGLRRALTT QAIYK