| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1801 |
|---|
| Symbol | |
|---|
| ID | 3705318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2035781 |
|---|
| End bp | 2036590 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637738285 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_343802 |
|---|
| Protein GI | 77165277 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4782] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.350111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATATGA TGAGCTCTCG AGAAAATTTC TGGGCTGGCG AAAGATTGTC TAATAAAGAT
CAAATCAAGG ATGTGGTATT GGATGATCCC GATCCAGCGG TTGATTCCCC TCTCATAGAA
GAAGCCATTT TCTTTGATAT GATGAAGGAC AAGCGGCTGT TGCTTCTCAT CCACGGATAT
AACAATGAAG CAGATGATGT TTGCCGGGCA TACTCGATTA TTCAAGATAA TGTACACCGT
TACTTAAAAG GAAATTATGA TGACATTGTC GGTTATACCT GGCCTGGCGG ATCGGAACCA
CTGAACTATT ATAAAGCAAG GAGACGGGCC GGAGCCGTGG CGCCGCGGGT CGCCCGCTGG
CTTGCTGAAC TGACCAAGGT GACCCAGGCT ATCGATGTCA TGGACCATAG CATGGGTACT
CGGGTAATTT TGTCTGCTTT AAGGATGGAC ACCACCGCTA GGCTGCATAA CTTATATAGC
ATGGCTTCGG CCGTTGAGGA TGAGTCAATT CAATATTCAA GAGAATATTT TTCCTCCACC
AAAGCCTGCG ATAGTGTGTA TGTTTTCCAT TCAAGACATG ACAAGGTGCT GCGGTTCGCC
TTCAAAGGCG CGGAGTGGGA CCGTGCGCTA GGATATTCCG GGCCTGAAGA CCCGGCGCTG
ATCATGACCC ATTCTCCGAA TGTTAAAGTA ATCAACTGCA GGCAGGTTAT CGACTCCCAT
GGAGGATATA AATATTCAGA ATCAGTCTAT AGATTTATTG CTAGGGAGCT TAAGTCCAGC
GAGGCGCCTC AGTATTCTAT TTTGGAGTAG
|
|---|
| Protein sequence | MYMMSSRENF WAGERLSNKD QIKDVVLDDP DPAVDSPLIE EAIFFDMMKD KRLLLLIHGY
NNEADDVCRA YSIIQDNVHR YLKGNYDDIV GYTWPGGSEP LNYYKARRRA GAVAPRVARW
LAELTKVTQA IDVMDHSMGT RVILSALRMD TTARLHNLYS MASAVEDESI QYSREYFSST
KACDSVYVFH SRHDKVLRFA FKGAEWDRAL GYSGPEDPAL IMTHSPNVKV INCRQVIDSH
GGYKYSESVY RFIARELKSS EAPQYSILE
|
|---|
| |