Gene Noc_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1779 
Symbol 
ID3704894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2006984 
End bp2008723 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content58% 
IMG OID637738264 
ProductABC transporter, ATPase subunit 
Protein accessionYP_343781 
Protein GI77165256 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGCG CCCACGCTGT GGTCAAAATC AAGAGGGTAA GCAAGACCTT CGCCACGGTC 
ACGGGGTCCT TGACCGCTAT CGCTGAATTA AGCGCCACTT TTCCCGGCAC CGGGATCACC
AGCCTGGTGG GACCCGACGG GGCGGGCAAA ACCACCCTGA TGCGATTAAT TGCCGGGCTA
CTGCTACCTT CCAAAGGGAT CATTCAGGTG CTGGGCCAGA ATACCGCCAA CCAAACGGTC
AAAATTCACC AGCAGATTGG CTATATGCCC CAAAACTTCG GACTCTATGA AGAACTCACA
GTGGGGGAGA ACCTTAACCT CTATGCTGAT CTCCAGGGCC TGGGGGGCCC GGAACGGCAG
CAACGATTTA AAGAACTGCT CCGCTTTACC GGACTAGCGC CTTTCCAAAC CCGGCCCGCC
GGCAAACTTT CAGGAGGAAT GAAACAAAAG CTAGGACTCG CCAGCACCTT AATCCGCCCA
CCTCGCCTCC TGCTACTCGA TGAACCAAGC GTGGGCGTAG ACCCCCTCTC CCGCCGCGAA
CTTTGGAATA TTGTCCGGAC CCTGATCAGT GAGGGCATGG CCGTTCTGTG GAGCACCGCT
TATTTGGATG AAGCGGAACG CAGCGATAGG ATGATTGTGC TTGACCAAGG CCGGAAGATC
TACGATGGAA CGCCCCAGGA CTTCATCGCG CCCCTGGAGG GCCGGAGCTT TCGCCTGTCT
GCCCCCCAGG GGAAGCTACG CGCTCTTCAG CGCCAGGCGC TGGCACAAGA GGGTATCGTA
GATGCGGCAC TGAGTGGTCA AACCTTGCGC CTAGTGACCG CCAGGGAGGC GGGAAAACCG
CGCCTTGAGG ATCTTACCGG GGCAGCGGAA ATCAAGGCTG TCCCGCCGTG CCTGGAGGAT
GCTTATATAG CCGCACTCCA ACCCCAAAGA AACACTGGAC CCATGGTCGG CAAAATCCAG
TTGGCCAGCA ATCATAGGCC ACACAAGACG GAACAAGCCC CTATTCAGGT CAAGGATCTT
ACCCGCCGCT TCGGTGCTTT TACAGCCGTT AACAAGGTCA GTTTTTCGGT GCGGCGCGGC
GAGATATTCG GTCTTCTCGG GCCTAATGGC GCTGGCAAAT CCACCATTTT TAAAATGCTC
GCGGGTCTTT TGCCTCCCAC CGAAGGAGAA GCTTTGGTAG CCGGTGTGGA CTTGCGCCGG
GCCGCCGCCA AGGCGCGAGG CCGTATCGGC TACATGGCCC AGCATTTCTC CCTTTATGCC
GCCTTGTCGG TCCAGCAAAA TCTGCGCTTT TTTGCCGGGG TTTACGGACT CAGGGGCCGC
CGGCGCCAGG AACAGATAAA AATCTTCTCC AAAGCCCTTG GCCTCGCCCC CTTGGCGGAT
CAGACCAGCG GTTCCCTGCC CTTGGGCTAT AAGCAGCGGC TTTCCCTGGC CTGCGCCATC
ATGCATGAAC CGGAGATCCT GTTTTTGGAT GAACCCACTT CCGGGGTGGA CCCCCTTACC
CGGCGGGAGT TCTGGCTTCG GATCAATGAA ATGGCCGAGC AGGGAGTCAC AGTCCTGGTG
ACCACCCACT TCATGGAGGA AGCCGAATAC TGCGACCGGC TCGCGATTAT TTACCAAGGG
CAATTAATCG CCCTGGGCTC CCCGGATGCG CTCAAGGGAG AGCAGGCAAC TCCGGAGTGC
CCTGAGCCCA GTATCGAGGA AGCTTTTATC CACTTGATTG AAGCCCGGCA GCCAGGCTAG
 
Protein sequence
MACAHAVVKI KRVSKTFATV TGSLTAIAEL SATFPGTGIT SLVGPDGAGK TTLMRLIAGL 
LLPSKGIIQV LGQNTANQTV KIHQQIGYMP QNFGLYEELT VGENLNLYAD LQGLGGPERQ
QRFKELLRFT GLAPFQTRPA GKLSGGMKQK LGLASTLIRP PRLLLLDEPS VGVDPLSRRE
LWNIVRTLIS EGMAVLWSTA YLDEAERSDR MIVLDQGRKI YDGTPQDFIA PLEGRSFRLS
APQGKLRALQ RQALAQEGIV DAALSGQTLR LVTAREAGKP RLEDLTGAAE IKAVPPCLED
AYIAALQPQR NTGPMVGKIQ LASNHRPHKT EQAPIQVKDL TRRFGAFTAV NKVSFSVRRG
EIFGLLGPNG AGKSTIFKML AGLLPPTEGE ALVAGVDLRR AAAKARGRIG YMAQHFSLYA
ALSVQQNLRF FAGVYGLRGR RRQEQIKIFS KALGLAPLAD QTSGSLPLGY KQRLSLACAI
MHEPEILFLD EPTSGVDPLT RREFWLRINE MAEQGVTVLV TTHFMEEAEY CDRLAIIYQG
QLIALGSPDA LKGEQATPEC PEPSIEEAFI HLIEARQPG