Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1779 |
Symbol | |
ID | 3704894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2006984 |
End bp | 2008723 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637738264 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_343781 |
Protein GI | 77165256 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTGCG CCCACGCTGT GGTCAAAATC AAGAGGGTAA GCAAGACCTT CGCCACGGTC ACGGGGTCCT TGACCGCTAT CGCTGAATTA AGCGCCACTT TTCCCGGCAC CGGGATCACC AGCCTGGTGG GACCCGACGG GGCGGGCAAA ACCACCCTGA TGCGATTAAT TGCCGGGCTA CTGCTACCTT CCAAAGGGAT CATTCAGGTG CTGGGCCAGA ATACCGCCAA CCAAACGGTC AAAATTCACC AGCAGATTGG CTATATGCCC CAAAACTTCG GACTCTATGA AGAACTCACA GTGGGGGAGA ACCTTAACCT CTATGCTGAT CTCCAGGGCC TGGGGGGCCC GGAACGGCAG CAACGATTTA AAGAACTGCT CCGCTTTACC GGACTAGCGC CTTTCCAAAC CCGGCCCGCC GGCAAACTTT CAGGAGGAAT GAAACAAAAG CTAGGACTCG CCAGCACCTT AATCCGCCCA CCTCGCCTCC TGCTACTCGA TGAACCAAGC GTGGGCGTAG ACCCCCTCTC CCGCCGCGAA CTTTGGAATA TTGTCCGGAC CCTGATCAGT GAGGGCATGG CCGTTCTGTG GAGCACCGCT TATTTGGATG AAGCGGAACG CAGCGATAGG ATGATTGTGC TTGACCAAGG CCGGAAGATC TACGATGGAA CGCCCCAGGA CTTCATCGCG CCCCTGGAGG GCCGGAGCTT TCGCCTGTCT GCCCCCCAGG GGAAGCTACG CGCTCTTCAG CGCCAGGCGC TGGCACAAGA GGGTATCGTA GATGCGGCAC TGAGTGGTCA AACCTTGCGC CTAGTGACCG CCAGGGAGGC GGGAAAACCG CGCCTTGAGG ATCTTACCGG GGCAGCGGAA ATCAAGGCTG TCCCGCCGTG CCTGGAGGAT GCTTATATAG CCGCACTCCA ACCCCAAAGA AACACTGGAC CCATGGTCGG CAAAATCCAG TTGGCCAGCA ATCATAGGCC ACACAAGACG GAACAAGCCC CTATTCAGGT CAAGGATCTT ACCCGCCGCT TCGGTGCTTT TACAGCCGTT AACAAGGTCA GTTTTTCGGT GCGGCGCGGC GAGATATTCG GTCTTCTCGG GCCTAATGGC GCTGGCAAAT CCACCATTTT TAAAATGCTC GCGGGTCTTT TGCCTCCCAC CGAAGGAGAA GCTTTGGTAG CCGGTGTGGA CTTGCGCCGG GCCGCCGCCA AGGCGCGAGG CCGTATCGGC TACATGGCCC AGCATTTCTC CCTTTATGCC GCCTTGTCGG TCCAGCAAAA TCTGCGCTTT TTTGCCGGGG TTTACGGACT CAGGGGCCGC CGGCGCCAGG AACAGATAAA AATCTTCTCC AAAGCCCTTG GCCTCGCCCC CTTGGCGGAT CAGACCAGCG GTTCCCTGCC CTTGGGCTAT AAGCAGCGGC TTTCCCTGGC CTGCGCCATC ATGCATGAAC CGGAGATCCT GTTTTTGGAT GAACCCACTT CCGGGGTGGA CCCCCTTACC CGGCGGGAGT TCTGGCTTCG GATCAATGAA ATGGCCGAGC AGGGAGTCAC AGTCCTGGTG ACCACCCACT TCATGGAGGA AGCCGAATAC TGCGACCGGC TCGCGATTAT TTACCAAGGG CAATTAATCG CCCTGGGCTC CCCGGATGCG CTCAAGGGAG AGCAGGCAAC TCCGGAGTGC CCTGAGCCCA GTATCGAGGA AGCTTTTATC CACTTGATTG AAGCCCGGCA GCCAGGCTAG
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Protein sequence | MACAHAVVKI KRVSKTFATV TGSLTAIAEL SATFPGTGIT SLVGPDGAGK TTLMRLIAGL LLPSKGIIQV LGQNTANQTV KIHQQIGYMP QNFGLYEELT VGENLNLYAD LQGLGGPERQ QRFKELLRFT GLAPFQTRPA GKLSGGMKQK LGLASTLIRP PRLLLLDEPS VGVDPLSRRE LWNIVRTLIS EGMAVLWSTA YLDEAERSDR MIVLDQGRKI YDGTPQDFIA PLEGRSFRLS APQGKLRALQ RQALAQEGIV DAALSGQTLR LVTAREAGKP RLEDLTGAAE IKAVPPCLED AYIAALQPQR NTGPMVGKIQ LASNHRPHKT EQAPIQVKDL TRRFGAFTAV NKVSFSVRRG EIFGLLGPNG AGKSTIFKML AGLLPPTEGE ALVAGVDLRR AAAKARGRIG YMAQHFSLYA ALSVQQNLRF FAGVYGLRGR RRQEQIKIFS KALGLAPLAD QTSGSLPLGY KQRLSLACAI MHEPEILFLD EPTSGVDPLT RREFWLRINE MAEQGVTVLV TTHFMEEAEY CDRLAIIYQG QLIALGSPDA LKGEQATPEC PEPSIEEAFI HLIEARQPG
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