Gene Noc_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1776 
Symbol 
ID3704891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2003634 
End bp2004272 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID637738261 
Productprotein-methionine-S-oxide reductase 
Protein accessionYP_343778 
Protein GI77165253 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0416821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA AAATAAAGAC AAGGGAACAA TTCCTTACTC ATGGCTTGAT GGTGCTATGC 
CTAGTGGTCC TTATCGGCCT GCGCCCCGCT CTGGCCCTAG AAGCAGGCAA GGCTCCTGCC
AAGGCAACCT TCGCGGGAGG GTGCTTTTGG TGTATGGAGC CGCCTTTTGA CAATCTCGAG
GGCGTTATTT CCACCACTTC CGGCTACATT GGCGGCCACA TGAAAAACCC TACTTATGAA
ACCGTCTCTG GGGGGAAAAC GGGACATGCG GAAGCCGTCC AAATCAGCTA TGATCCCAAC
CAGATCAGCT ATGCTGAATT ACTCGCTATC TTCTGGCGTA ATATTGACCC CCTTGCAGAA
AACCGACAAT TTTGTGACCA CGGCAGCCAA TACCGGTCCG CCATTTTCTA CCACAACGAA
ACCCAGCAAC GGCTGGCGGA AGAATCGAAA GCTCAATTAG CCCAATCCGG CCGCTTCAAT
CAACCCATCG TGACGGAAAT TAAACTCGCC ACCCAATTTT ACCCTGCCGA AGCCTATCAT
CAGAATTATT ACCAGAAAAA TCCGATCCGC TATAAGCTGT ATCGTTTTGG TTGCGGCCGG
GATCAGCGTC TCCAAGAACT TTGGGGCGAT GCTAGCTAA
 
Protein sequence
MTEKIKTREQ FLTHGLMVLC LVVLIGLRPA LALEAGKAPA KATFAGGCFW CMEPPFDNLE 
GVISTTSGYI GGHMKNPTYE TVSGGKTGHA EAVQISYDPN QISYAELLAI FWRNIDPLAE
NRQFCDHGSQ YRSAIFYHNE TQQRLAEESK AQLAQSGRFN QPIVTEIKLA TQFYPAEAYH
QNYYQKNPIR YKLYRFGCGR DQRLQELWGD AS