| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1758 |
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| Symbol | |
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| ID | 3704775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1977912 |
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| End bp | 1980014 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738241 |
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| Product | PAS sensor diguanylate cyclase/phophodiesterase |
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| Protein accession | YP_343760 |
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| Protein GI | 77165235 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.250633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCC ACCAGCACCG CGGAATTAAC AAAATGCGGG GGCTGCGAGT ATTAATCGTG
GAAGATTCTG AAGATGACGC TCTCCTCCTG GAGCGCCACC TTCGGCGCGG TGACTACCAG
CCTTTCGTTA AACGGGTCGA AACCCGGGAA ACTATGCTCG CAGCACTCCA AACCCAGCCC
TGGGACATTA TACTCTCAGA TCACAGCCTA CCTCATTTTG GCTCCATGGA CGCCTTGACT
TTGCTGCAAA AAGAAAGCAT TGATATACCT TTTATCATGG TCTCTGGCAC AGTAGGGGAG
GATCGCGCCG TTGAAATCAT GAAGGCTGGC GCCCACGACT ATATCATGAA GGATAATTTG
CGCCGCCTGG TTCCCGCAGT AGAGCGGGAA TTACGCGAGG CCAACATCCG GCGGCAGCGC
CAAGCCGTGG AAAACGAGCG CGCCCGTCTA AGCTCCATCC TGGAAGCTAC CCCCGATCTG
GTGGCCATCA TGGACCTTGA AGGCCGTATT CACTATATGA ACCAGGCGGG CCGCCAGTGG
CTCGGCTTTA TTAAAAAAAA CCATTATGCC GGAGCGTCAC TGCTCGCGCA TTATCCCTTA
TGGACAGCCT CCCTGATACG GGACACGGCA ATCCCCGCCG CTTTACGGGA AGGAGTCTGG
GAAGGAGAAG CTGTTATTTT GAATCCCAGT GGCGGAGAAA TTCCGGTCTC CCAAGTGATC
CTTTCCCATC GAAATGCCCT TAACCAAGTT GAGTTCCTCT CCACCATTGC CCGGGATATC
AGCGAACGTA AGCACTATGA GCAAGAATTA CAATACCGGG TTACCCACGA TACCCTCACC
CACCTCCCCA ACCGGATTTT GCTCCGGGAC CGGCTGATTC AAGTCCTAGC CCACGCTAAA
CGCAATCAGC GCCTGACCGC GGTCCTGTTT CTGGATGTGG ACAATTTTAA ACAAATCAAC
GACGGTTTGG GGCACTTAAC CGGAGATAAG TGCCTACGTA CCCTTGCGCA CCATCTGGCA
GGCTGTATTC GTGAGAGTGA CACCCTCGGG CGCTATGGAG GCGATGAGTT TCTAATTATT
CTCAGTGACT TACGTAGTTA CTCTGATGTA GAAACCCTTA TAAAAAAAAT TCGCGCCACC
GTGAGCCAGC CCCTCAAGCT TAATAATAAT GATGTCTTTA TCACCTTGAG CATCGGCGTT
TCCCTTTATC CCCAGGATGG TGATGATGAG GAAGCACTAT TAAAAACTGC CGATGCCGCT
ATGCACACCG CTAAGCATAG TAGTCCGGGG CAATGCCGAT ACTATCGCCC TGAGATGAAT
GTTCGAGGAA GTGAATTACT CGCCCTGGAG ACGGATCTCC ACCGTGCCTT GGAACGAGAA
GAATTTGTCC TTTATTATCA ACCGCAATTA GACGTTACGA CTGGCCAGAT CACCGCAGTA
GAAGCATTGA TACGTTGGCA GCATCCTAAC CGCGGATTGG TTTCTCCTAG AGACTTCATT
CCGCTGCTGG AACAAACCGG CCTTATCGAA GAGGTGGGTA AGTGGGGGCT AAACACGGCT
TGTAGACAAG CTAAAGCCTG GCATTCACAA GGCTATCCCA TCCGCATGGC GGTTAATTGT
TCTGCCCGCC AGTTTCAACA GCATTTTCTG GATATCGTAC ATCAAATTCT CCAGAAACAG
TCATTAGACC CCGCCTACCT TGAACTTGAA GTCACAGAAA GCGTCGTGAT GCAAGATACG
CAATCGGCAA CCTATATTTT ACAACGCCTC AAGGAAATGG GCGTCACCTT AGCCATTGAC
GATTTTGGTA CCGGTTATTC ATCGCTTGCT TATCTTAAAC GTTTCCCTAT CCATAGCCTG
AAAATTGACT GCTCATTCGT CCGCGACGTC ACTAAAAATG AAGAAGATGC GGCCATTGCC
GAAACGATTT TGCTGCTCGG AAACAGTTTG GGACTCGAAG TGGTGGCCGA AGGCGTAGAA
ACAGAAGCCC AAATGCGGTT CTTTCAAGAC CGCCACTGCC ATCGCATCCA AGGCTATTGG
ATCGGGCGGC CCATGCCTGC TAAAGATCTT TTCCCGTTAA TTACTGGCAG AAATAACCCC
TAG
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| Protein sequence | MKRHQHRGIN KMRGLRVLIV EDSEDDALLL ERHLRRGDYQ PFVKRVETRE TMLAALQTQP
WDIILSDHSL PHFGSMDALT LLQKESIDIP FIMVSGTVGE DRAVEIMKAG AHDYIMKDNL
RRLVPAVERE LREANIRRQR QAVENERARL SSILEATPDL VAIMDLEGRI HYMNQAGRQW
LGFIKKNHYA GASLLAHYPL WTASLIRDTA IPAALREGVW EGEAVILNPS GGEIPVSQVI
LSHRNALNQV EFLSTIARDI SERKHYEQEL QYRVTHDTLT HLPNRILLRD RLIQVLAHAK
RNQRLTAVLF LDVDNFKQIN DGLGHLTGDK CLRTLAHHLA GCIRESDTLG RYGGDEFLII
LSDLRSYSDV ETLIKKIRAT VSQPLKLNNN DVFITLSIGV SLYPQDGDDE EALLKTADAA
MHTAKHSSPG QCRYYRPEMN VRGSELLALE TDLHRALERE EFVLYYQPQL DVTTGQITAV
EALIRWQHPN RGLVSPRDFI PLLEQTGLIE EVGKWGLNTA CRQAKAWHSQ GYPIRMAVNC
SARQFQQHFL DIVHQILQKQ SLDPAYLELE VTESVVMQDT QSATYILQRL KEMGVTLAID
DFGTGYSSLA YLKRFPIHSL KIDCSFVRDV TKNEEDAAIA ETILLLGNSL GLEVVAEGVE
TEAQMRFFQD RHCHRIQGYW IGRPMPAKDL FPLITGRNNP
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