| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1756 |
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| Symbol | |
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| ID | 3704773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1975322 |
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| End bp | 1977478 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738239 |
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| Product | PAS sensor signal transduction histidine kinase |
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| Protein accession | YP_343758 |
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| Protein GI | 77165233 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.977279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCC ACACCCTATG GAAACGGTTT GCCCTCGTTT TCTTCCCACT TGCGGGGCTG
ACCACCTTGT CGTTCATCTC CCTTTATCAA GCGGAATTCA AAACCCTACG GGCCTTGACC
GAGCTTAGCG AGAAAGATTC TCTGCAATTA CTCAGGGAGG AAATCCGTGA TGAATTTGAC
GCCATTCAGG CCACCCTCCT ATTTTTGTCG CGGCACCAAG CCCTCAAGGA TCTTTTGGCA
GGGAGTGAAT CGGAGCAACG ACTGGCCCAA GATTACGTGG TCTTATTGGG AAGCAGAGAG
CGCTATGACC AGATCCGTCT GCTTGATTTA CAGGGCAAGG AATGGGTTCG GGTAAACTTT
AATGGAGGCC AGCCAAGCAT CGTTCCCCCA GAGGGATTAC AGAACAAGAA AGCCCGCGGC
TACTTCCAAA AAGCCTTGCA GCTTCAACCA GGAGAAATTT ACCTTTCTCC GCTTAACCTT
AATACCGAGA GGGGCATCAT CGAGCAGCCC CTAAAGCCAA CCATTCAGGC TATCACGCCG
ATCTTCGATG AGCAACGACG TAAGCAGGGA ATACTGGTGC TGAATTACCG AGGCATCCAC
CTTTTGGATA AACTTCACGC AGCCGCACAA AATACTAAAA AAGCACTTTG GTTAGTCAGG
GGAAGTGGCC TTTGGCTTTG GGAGTCCGGC GCCGGGCAGA AGCAAGGAGT GATCTATCTC
GAAAAAGGCA AGCAAGCATT CGCGGTTGCT TATCCTGATC TCTGGGCGCT AATCCAGAAC
AATGACGAAG GTCAATTCTA TGCCCATAAG GATCTCTTTA CTTATACCAC CATCACCCCC
ACGGCAAAAA CTTTCCCCCC CATAGCAAAA CTTCATTCCT CTATCCACTG GAAGCTGATC
TCCCAGCAGT CCTTTCCTGT CCTATCTACG ATGATATCAA CGAGCCGCAT TCAGCGACTG
ATACTTCTCT ATGGTATCTT TCTTACTGTC TTTATAATCG TAGCCTGGCG GCTGGCCTAC
GTACATCAAC GCCGCGAAAG AGATACCCAG GCGGTGCGTC TCAGCGAGCT TCGCTTCCGG
GGTCTTTTTG AGGCGGTGCC CGATGGTATC GTGATGACTG ATTCCAACGG CCAAATTCTC
CTCGTGAACA AACAAGCAGA AAAAATATTT GGCTATTCCC GGGAGGAATT AGCGGGGCAA
AAAATAGAAA TCCTACTGCC AGAGCAACAT CGCAAAGCTC ACGTTATCTA TCGCCAAGGT
TATACTCGGG ATGCCATTAC GCGGCCAATG GGAGTTGGAT TGGATCTTTA CGGACGGCGC
AAGGACGGTA CCGAATTTCC AGCGGAAATT AGTTTAAGCC CCCTTAATAA AAAAGAAGTG
GATTTCTCTA TTATCAGCAC CATACGCGAT ATCAGTGAGC GAAGAAAAAC TGAAAAAAAA
GTTAAAGAAT TGAACCGGAA ACTGCAACAA AATGTGACCG AGCTGAGCAC GTTAAACGGA
GAATTGGAAG CCTTCAGCTA TTCAGTTTCC CATGATCTAC GGGCGCCCTT GCGCAGTATC
GATGGTTTCA GCCAAGCCCT GCTAGAGGAT TATGAAGATA AACTTGATAG CGAAGGGCAA
GACTATTTAC AGCGGGTACG CGCAGCAACT CAGCGAATGG GAAAGCTTAT CGATGATTTA
CTGCAACTCT CCCGTATTAG CCGGGTGGAG ATGATACCCC AGAAGGTAGA CCTTAGCTGC
TTGGCGCAAG CAATTGTCAC GACTCTACGG GCCGAGGAAC CTCAACGGCA GGTTGAGTTT
TGTATCGAGC AGGGTCTTAC CGCCTCAGGC GATTCGCACT TGCTTCAAAT TCTGCTTGAC
AACTTGCTCG GCAATGCCTG GAAATTCACT GCTCATCAGC CCCAGGCCCA GATCACGCTG
GGAATGCTAG CGAAAGAAGG CAAGCCTGTT TTCTTTGTCC AGGACAATGG CGCTGGCTTT
GATATGCGTT ATATTGACAA ACTATTCGAT CCCTTCCAAC GACTACACGG CGCCAGCGAA
TATCCTGGAA CCGGGATAGG ACTGGCTACC GCGCGGCGCA TTGTCCACCG CCATGGAGGG
CGAATTTGGG CGGAAGGACA AATTAACCAA GGGGCCACTT TTTATTTTAC GCTTTAA
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| Protein sequence | MSTHTLWKRF ALVFFPLAGL TTLSFISLYQ AEFKTLRALT ELSEKDSLQL LREEIRDEFD
AIQATLLFLS RHQALKDLLA GSESEQRLAQ DYVVLLGSRE RYDQIRLLDL QGKEWVRVNF
NGGQPSIVPP EGLQNKKARG YFQKALQLQP GEIYLSPLNL NTERGIIEQP LKPTIQAITP
IFDEQRRKQG ILVLNYRGIH LLDKLHAAAQ NTKKALWLVR GSGLWLWESG AGQKQGVIYL
EKGKQAFAVA YPDLWALIQN NDEGQFYAHK DLFTYTTITP TAKTFPPIAK LHSSIHWKLI
SQQSFPVLST MISTSRIQRL ILLYGIFLTV FIIVAWRLAY VHQRRERDTQ AVRLSELRFR
GLFEAVPDGI VMTDSNGQIL LVNKQAEKIF GYSREELAGQ KIEILLPEQH RKAHVIYRQG
YTRDAITRPM GVGLDLYGRR KDGTEFPAEI SLSPLNKKEV DFSIISTIRD ISERRKTEKK
VKELNRKLQQ NVTELSTLNG ELEAFSYSVS HDLRAPLRSI DGFSQALLED YEDKLDSEGQ
DYLQRVRAAT QRMGKLIDDL LQLSRISRVE MIPQKVDLSC LAQAIVTTLR AEEPQRQVEF
CIEQGLTASG DSHLLQILLD NLLGNAWKFT AHQPQAQITL GMLAKEGKPV FFVQDNGAGF
DMRYIDKLFD PFQRLHGASE YPGTGIGLAT ARRIVHRHGG RIWAEGQINQ GATFYFTL
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