| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1747 |
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| Symbol | |
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| ID | 3705008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1963795 |
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| End bp | 1966500 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738230 |
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| Product | hypothetical protein |
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| Protein accession | YP_343749 |
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| Protein GI | 77165224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.162879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCCCC CCCATTCCAA CCATTACGGG ACAAATTCGC GGTACATTAA AAACGCTAAT
GGCTTTCTCA CGAGCTGGGT CGGTTGGGTT TATCGCTTAG CACCCTGGGT TCTCATCATC
ATTTTTTTGC TTACCGGGGG AGTATTCTAC TATACAGTGG AAAACTTGGG CGTCGATACC
GACACCGCAA ATATCCTCTC ACCCGACCTC CCTTTTCGGC AAAGCAACGA GCGCTACACT
CATTTGTTCC CGCAATATGA GGATACGCTC ATTATTGTTA TCGAGGGGAA TGTTCCCGAG
CGCATTTGGG AAGGAAGCAA GCAACTTGCT GCTAAGCTAG AAGCAAGCGA TACTTTATTT
AAACGCGTCT ACCTACCCCA GGCAAACAAC TTCTTTGAGC GTTATGGCTT AATGTACCTG
AGTTTATCAG AACTTGAAAA AACAACAGAC AGCCTAGCTC AAGCACAGCC GTTTTTGGGC
CGGCTGACCC AAGATCCCTC CCTAGGCGGC CTGCTCGATA TGCTCAACGA AGTCATCAAC
GCCAAACAGG CAGGGGATAC CAACCTCGAA TTACAACCTA TCCTTGGCCC TATTAGCCAA
GCTGTAGAAT CCATCCTCTC CGGGCAACCC AATATTCTGT CCTGGCAAGC GTTGATGAGT
CCGGATGAGA CGGCATCTTC TAAGGAACAA CGCCAATTTA TCATTGCTCA ACCTCGAATG
GATTTCAACC AAATCCTGCC AGCAGGACCC GCTATTGAAG CCGTTCGTGC CTTCTCCGAG
GAACTTCAGC TTGATTCTCT TCATGGTTTG CAAGTGCGAA TTACAGGAGA TGTAGCGCTC
TCCCATGAAG AGTTAGAAAG TGCCATAGCA GGAGCTAAAA TAGCAGGGCT CTTGGCGATA
CTCATGACGG GCGTCCTGCT TCTGCTCGGC TTACGATCTA TCTCCCTCGT ACTGGCAACC
TTAGTTACCC TAGTAATCGG GCTTATTCTC ACCGCTGGGT TTGCAACGGT TACAATAGGG
CATCTGAATT TAATTTCCAC TGCCTTTGCC GTACTTTATA TTGGCTTGGG CACGGCCTAT
GCCATTCATT TTTGCCTGCG CTACCAGCGT CTTATTCAAG CTGGATTGGG GCAACCAGAA
GCTCTGTCCG TAACTGCTTC GGAAGTTGGA ACAGCGCTTA CGCTATGCGC TCTCACCACT
GCTATTGGTT TTTATGCTTT CATCCCCACT GATTTTGCAG GCGTATCCGA ACTAGGAATC
ATCGCCGGCA CCGGGATGTT CATCAGCCTA GCCCTAACGT TAACCTTCTT ACCTGCTTTA
CTGCGGCTGT TACCCATGCC ATCGTCGACC CGCTCTCGGG GAGCGCGGGG AAAGACGCTG
AGCTTTTTAT CCAACATACC GATAGACTAC CGGCGTCAGC TTCTCGGAAG CGGGTTAATT
TTAGGACTGG GCGCGCTCAT TCTGCTGCCC CAAAGCCATT TTGACTACAA CCCACTTAAC
CTGCGCAATC CCAACTCTGA GTCTGTCTCT ACCTTGCTTG AACTTATTGA CACTGAAACC
ATCCCTCCCT TAAGCGCAAT CGTATTAGCC TCCGACGCCC GCAAAGCACA GCAACTTGCA
GACCAGCTCC GGCAACTAGA CACAGTGGGA ACGGTAGTAA CAGTTCAAGA CTTTATTCCC
AAAAAGCAAG AAGAAAAACT CGCCATTATT GATGAAATGG CGCTACTGCT CGGTCCTCTA
CTAGGCCCTT CAGAGTGGGA ATCTAAAACA AAAACGGAAC AAAAATACAT TACCCTCCGC
CGGTTCTTAC AAACCCTGGA TAATTATCTC GCCAGCTCGA CGCCCCCCCC CTCACCAGCG
GCCTATCAAC TGGCAGAGAA TTTTCGGCAA TTACTTAACC GTCTCAAGCA AAGCAACCTA
GTGGCCCAAA AACAGTTGCT GCTTACTCTC CAGCACAACC TACTGGCAAC CTTACCGGAT
AACCTGACAC GGCTAGGACA ATCATTGCAA GCTGGACCTA TATCTTTGGG TACGCTGCCG
CCTGATCTCC GCCGACGCTG GATAACCCCT GCCGGCATCC AGCGAATTGA GGTTTTCCCC
AAGGAAGGAC TCAATATTAA CGATACCACT TCTCTACGTC ACTTTGTCAA TGACATTCAT
AACCTTGCCC CTAGCGCCAC CGGCGCGCTC ATTCTTAGTT TTAGATCGGG GGAAACCATC
GTCGCAGCAT TCCAACAGGC TTTTATCTAT GCCTTAATAG CCATCACCAT CGTGTTACTC
TTTCTCCTGC GCAGCCCTAG AGATGCAATA TTAGTCCTGA TTCCGCTGCT CCTGGCAGGC
GTTATGCTGG GTGCAGCGAT GGTAATACTC GATACCCCTT TCAATTTCGC CAATATCATT
GCCTTGCCTC TTATTCTTGG AATCGGTGTG GATAATGGTA TCCATATGGT CTGGCGAGTA
CGGCAAGCAC CGCCCAAAAC GGGAAACCCT CTTCAGACCA GCACGGCCCT TGCCGTGATA
CTCAGTGCCT TAGTGACGGT TTGCAGCTTT GGCAATCTGT TATTTGCCTC CCACCCCGGT
ATGGCAAGCA TGGGGCTGTT ACTCAGTGTC GGCGTTGCCC TGACTTTGCT TTGCACCCTG
TTGCTGCTGC CAGCTTTACT ACTGGCAACC CAAAATCGTT TTAGTCTTGC CGGTGAGAAA
AAATAA
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| Protein sequence | MPPPHSNHYG TNSRYIKNAN GFLTSWVGWV YRLAPWVLII IFLLTGGVFY YTVENLGVDT
DTANILSPDL PFRQSNERYT HLFPQYEDTL IIVIEGNVPE RIWEGSKQLA AKLEASDTLF
KRVYLPQANN FFERYGLMYL SLSELEKTTD SLAQAQPFLG RLTQDPSLGG LLDMLNEVIN
AKQAGDTNLE LQPILGPISQ AVESILSGQP NILSWQALMS PDETASSKEQ RQFIIAQPRM
DFNQILPAGP AIEAVRAFSE ELQLDSLHGL QVRITGDVAL SHEELESAIA GAKIAGLLAI
LMTGVLLLLG LRSISLVLAT LVTLVIGLIL TAGFATVTIG HLNLISTAFA VLYIGLGTAY
AIHFCLRYQR LIQAGLGQPE ALSVTASEVG TALTLCALTT AIGFYAFIPT DFAGVSELGI
IAGTGMFISL ALTLTFLPAL LRLLPMPSST RSRGARGKTL SFLSNIPIDY RRQLLGSGLI
LGLGALILLP QSHFDYNPLN LRNPNSESVS TLLELIDTET IPPLSAIVLA SDARKAQQLA
DQLRQLDTVG TVVTVQDFIP KKQEEKLAII DEMALLLGPL LGPSEWESKT KTEQKYITLR
RFLQTLDNYL ASSTPPPSPA AYQLAENFRQ LLNRLKQSNL VAQKQLLLTL QHNLLATLPD
NLTRLGQSLQ AGPISLGTLP PDLRRRWITP AGIQRIEVFP KEGLNINDTT SLRHFVNDIH
NLAPSATGAL ILSFRSGETI VAAFQQAFIY ALIAITIVLL FLLRSPRDAI LVLIPLLLAG
VMLGAAMVIL DTPFNFANII ALPLILGIGV DNGIHMVWRV RQAPPKTGNP LQTSTALAVI
LSALVTVCSF GNLLFASHPG MASMGLLLSV GVALTLLCTL LLLPALLLAT QNRFSLAGEK
K
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