| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1744 |
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| Symbol | |
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| ID | 3705005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1960598 |
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| End bp | 1961560 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637738227 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_343746 |
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| Protein GI | 77165221 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.556321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTCA CTCTCGCCCA ACCCCGCGGT TTTTGCGCTG GGGTAGTGCG TGCTATTGAT
ATAGTCGAGC ACGCGCTGGA AATTTACGGT GCTCCGATTT ATGTGTTACA CGAAATCGTT
CACAACCAGC ATGTTGTTGA GGATCTACAG CGGCGTGGGG TTATTTTTAC CGAAGATTTA
GCCTCTATAC CCGCTGGTTC AGTAACCATC TTCAGCGCCC ATGGAGTTTC CACAGCCGTT
GTGGAAACAG CCAAAAAAAA TGATTTACAG GTAATTGACG CCACCTGCCC GCTGGTGACT
AAGGTTCATC TCCAGGCCAA AAAATACTAC CGCCAAGGAG ATGAGCTGAT TATCATTGGC
CACGCTGGCC ACCCTGAAGT AGAAGGCACC CGTGGGCGAG TCAAGGGAAC CGTTTATGTC
CTGGATTCCG TAGCGGAAGT TGAAAATCTA GCAGTCAAGG ATCCGGAACA TATCGCTTAT
GTCACCCAAA CCACTCTGAG CATCGATGAT ACCCGCGATG TGGTCGATGC TCTTAAGAAA
CGCTTTCCTA AAATTCATGG TCCAGGACTC GACGATATCT GCTATGCAAC CCAAAATCGC
CAAAATGCTG TCCGTGAGAT GAGCAAAAAA GTAGACATCT TACTAGTCGT TGGCGCACGT
AATAGCTCGA ACTCCAATCG CCTACGGGAA GTTGGCGAAC AAAATGGCAT CACCGCCCAT
CTTATCCAAG ATGCAAAAGA TTTGGATTCA AGTTGGTTTA CCTCCCAGTC GCGAGTGGGA
ATTACAGCCG GCGCTTCAAC ACCAGAAATC CTCGTGCAGG GGGTATTAAA TGAGCTGCGC
AGCTATGGCG TTGAAGAAGT CATGGATTTA GACGGGGTGC AAGAATCCAT TAGTTTTCGC
CTACCCACAA TGTTGCCACG CGCTAAGCTA AGGCAAAAAC AAGCGATTAA CTCTAAGCAG
TAA
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| Protein sequence | MKVTLAQPRG FCAGVVRAID IVEHALEIYG APIYVLHEIV HNQHVVEDLQ RRGVIFTEDL
ASIPAGSVTI FSAHGVSTAV VETAKKNDLQ VIDATCPLVT KVHLQAKKYY RQGDELIIIG
HAGHPEVEGT RGRVKGTVYV LDSVAEVENL AVKDPEHIAY VTQTTLSIDD TRDVVDALKK
RFPKIHGPGL DDICYATQNR QNAVREMSKK VDILLVVGAR NSSNSNRLRE VGEQNGITAH
LIQDAKDLDS SWFTSQSRVG ITAGASTPEI LVQGVLNELR SYGVEEVMDL DGVQESISFR
LPTMLPRAKL RQKQAINSKQ
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