| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1734 |
|---|
| Symbol | fadI |
|---|
| ID | 3705051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1942739 |
|---|
| End bp | 1944031 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637738217 |
|---|
| Product | 3-ketoacyl-CoA thiolase |
|---|
| Protein accession | YP_343736 |
|---|
| Protein GI | 77165211 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.302868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA GTAGGCATGC GGTAATTGTG GCGGGGTTGC GCACGCCCTT TGCTAAACGG
CGGACAGCGT TGAAGCATTT CTCTCCCTTG GGTCTGGGGA AACTGGTGTG CGGGGAACTG
TTGGAACGCG TGGATATCGA TCCTAGAACG GTGGAGCAAG TGGTGTTTGG CCAGGTTATT
CCGTCATTGC AAGCTCCGAA TGTCGCTCGG GAGATTGTGT TAGGGCTTGG GATGCCTGCG
GAAATTCCAG CTTATACCGT CTCCAAAGCC TGTATCACCA GCTATCAAAC CACGGTCAAT
GTATTAGAAG CCATCCAGGA AGGGGCCATT GAGTGTGGAA TTGCGGGTGG AACGGAGAGT
GCAAGCGATG TGCCTATCGC AGTTTCTAAA CCTTTCCAAG AGGCCCTGCA CGAGGCTGCC
AGTGCTAAAA CCTTGCTCCA ACGCCTCGCC GCCTTCAAGG AAATTTCTCT CAGGGACTTA
CGTCCCCGCC CGCCTGCGAT TGCGGAACCT ACCACGGGAG AGACTATGGG AGAAGCGGGG
GAGCGGATGG CCAAGGAGAA TGGTATCTCC CGGCAAGCCC AGGATGAATT TGCCCGCCGT
AGCCATCAGC ACGCCGCCCA GGCTTGGCGA GAGGGGAAAT TTTCCGAGGA AGTGATGGCC
GTGCCTATTC CACCTGAGTT TACGGATACC TTAGAGGAGG ATAACCTGCT GCGGCCGGAG
TCCGATTTGG CCGATTACGC CAAACTGAAC CCCGTTTTTG ATCGGAAATA CGGCTCTGTC
ACCGCGGGGA ATAGTTCTCC TTTAACCGAT GGAGCCAGCG CCCTATTGTT AATGAACGAG
GCTAAGGCAA GAGCTTTGGG AATGCCTATT TTGGGAAAGA TTCGCAGCTA TGCCTTTGCA
GCGCTGGACC CCTTTGATCA GCTGCTGCTA GGGCCTGCCT ATGCAACCCC TATTGCTTTG
GAGCGGGCGG GAATGACCTT AGCAGATATG GATGTGATCG ATATGCACGA AGCCTTTGCC
GCCACGACCT TATCGACCAT CCAAGCCTTC GAATCGGTCT CCTTTGCCCG GGAAAAATTA
AACCGGAGCC AGCCGATTGG AGAAGTCGAT TGGGATAAAT TGAATGTCAA TGGGGGGTCT
ATTGCCATGG GCCACCCCTT TGCCGCTACG GGCGCCCGGG AAATTGCTCA GACTCTGGGA
GAATTGAAGC GGCGCGGTGG CGGAGTTGCC CTGTGTACCG CCTGCGCGGC GGGGGGAATG
GGTGCGGCTA TGGTGCTGGA GGTAACCTCA TGA
|
|---|
| Protein sequence | MNKSRHAVIV AGLRTPFAKR RTALKHFSPL GLGKLVCGEL LERVDIDPRT VEQVVFGQVI
PSLQAPNVAR EIVLGLGMPA EIPAYTVSKA CITSYQTTVN VLEAIQEGAI ECGIAGGTES
ASDVPIAVSK PFQEALHEAA SAKTLLQRLA AFKEISLRDL RPRPPAIAEP TTGETMGEAG
ERMAKENGIS RQAQDEFARR SHQHAAQAWR EGKFSEEVMA VPIPPEFTDT LEEDNLLRPE
SDLADYAKLN PVFDRKYGSV TAGNSSPLTD GASALLLMNE AKARALGMPI LGKIRSYAFA
ALDPFDQLLL GPAYATPIAL ERAGMTLADM DVIDMHEAFA ATTLSTIQAF ESVSFAREKL
NRSQPIGEVD WDKLNVNGGS IAMGHPFAAT GAREIAQTLG ELKRRGGGVA LCTACAAGGM
GAAMVLEVTS
|
|---|
| |