Gene Noc_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1727 
Symbol 
ID3705044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1933785 
End bp1934432 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content58% 
IMG OID637738210 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_343729 
Protein GI77165204 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATGG TGACGAAAAT CGCGCGCTGG TTGTTCTTTA CTCTAATTGT GCGGCCACTG 
ATCTTGATCG TGCTGGGTTT GAACGTCCGT AATCGCGAAC GACTGCCGAA CCGGGGCCCA 
GCTATCATTG CAGCCAACCA CAACAGCCAC TTGGACACCT TGGTGCTCAT AACCCTGATG 
CCGCCTAGCC TATCGCATCG GGTTCGACCC GTAGCCGCTG CTGACTACTT CTTGCGTAAT 
CGGCTGCTGG CTTGGTTCGC CAAGGATATC ATCGGCATCC TACCCATCAC CCGGCAGCGA 
ATTGAGCGAG GGGTGGATCC ACTAGAGATT TGCGACGCAG CCCTAAAACG CGGTGAAATC 
CTGATCTTCT TTCCAGAAGG CACTCGCGGC GAACCCGAAC GGATAAACCG TTTCCGCAGG 
GGTATCGCCC ATCTCGCCGA GCGGCATCCC GACGTACCCG TGGTGCCAGT ATTTATGCGT 
GGACTAGGCA AAGCCCTGCC CAAAGGCGAG GCGCTACTAG TGCCTTTCCT ACTAGACGTC 
TACATTGGCG AGCCGCTGAC GGGGCGGGTG CATGCGGATT TCCTTAATAC CCTGCGGGCG 
CGTATACGCT CCTTGGCGGA GACCGACAAA GGGCCAGAAT GGGACTGA
 
Protein sequence
MRMVTKIARW LFFTLIVRPL ILIVLGLNVR NRERLPNRGP AIIAANHNSH LDTLVLITLM 
PPSLSHRVRP VAAADYFLRN RLLAWFAKDI IGILPITRQR IERGVDPLEI CDAALKRGEI 
LIFFPEGTRG EPERINRFRR GIAHLAERHP DVPVVPVFMR GLGKALPKGE ALLVPFLLDV 
YIGEPLTGRV HADFLNTLRA RIRSLAETDK GPEWD