Gene Noc_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1716 
Symbol 
ID3704638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1920232 
End bp1920657 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content47% 
IMG OID637738197 
Producthypothetical protein 
Protein accessionYP_343718 
Protein GI77165193 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTT CCAACCGCCC CCGTTACGCC ATCAGCGCGA TGATGAATTT GGCCTTAGTC 
AAACAGCAAA AATCAATTAC TTTGGGCGAT ATCGCCCAAC TAGACAATAT TTCTGTTTCT
TATCTAGAAC AAATATTTGC CAGCCTGCGC CACCATGGCT TAGTAGAAGG AATACGTGGG
CCGGGAGGAG GTTATCATCT TACACGCGCT GCTGAAAAAA TTACCATTGC GGAAATTATT
GCCGCAGTGG ATAAACAACC AGGCAAGCTC AACCCCCTGG CAATTGCCAC TAATTCCGTA
AGTGAAGCAG AGCGCCTTTG GCATGATTTC AGTATGCGGC TTTACGATTT CCTTAACCAA
ATCACGCTTG CGGATCTAGC ACGACGCTGG CCTCACTCGC ACCTCGGAAT TAAACATGGA
TGTTGA
 
Protein sequence
MRFSNRPRYA ISAMMNLALV KQQKSITLGD IAQLDNISVS YLEQIFASLR HHGLVEGIRG 
PGGGYHLTRA AEKITIAEII AAVDKQPGKL NPLAIATNSV SEAERLWHDF SMRLYDFLNQ
ITLADLARRW PHSHLGIKHG C