Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1716 |
Symbol | |
ID | 3704638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1920232 |
End bp | 1920657 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637738197 |
Product | hypothetical protein |
Protein accession | YP_343718 |
Protein GI | 77165193 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTTT CCAACCGCCC CCGTTACGCC ATCAGCGCGA TGATGAATTT GGCCTTAGTC AAACAGCAAA AATCAATTAC TTTGGGCGAT ATCGCCCAAC TAGACAATAT TTCTGTTTCT TATCTAGAAC AAATATTTGC CAGCCTGCGC CACCATGGCT TAGTAGAAGG AATACGTGGG CCGGGAGGAG GTTATCATCT TACACGCGCT GCTGAAAAAA TTACCATTGC GGAAATTATT GCCGCAGTGG ATAAACAACC AGGCAAGCTC AACCCCCTGG CAATTGCCAC TAATTCCGTA AGTGAAGCAG AGCGCCTTTG GCATGATTTC AGTATGCGGC TTTACGATTT CCTTAACCAA ATCACGCTTG CGGATCTAGC ACGACGCTGG CCTCACTCGC ACCTCGGAAT TAAACATGGA TGTTGA
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Protein sequence | MRFSNRPRYA ISAMMNLALV KQQKSITLGD IAQLDNISVS YLEQIFASLR HHGLVEGIRG PGGGYHLTRA AEKITIAEII AAVDKQPGKL NPLAIATNSV SEAERLWHDF SMRLYDFLNQ ITLADLARRW PHSHLGIKHG C
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