| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1703 |
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| Symbol | |
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| ID | 3704625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1906186 |
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| End bp | 1907292 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738184 |
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| Product | PAS sensor, signal transduction histidine kinase |
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| Protein accession | YP_343705 |
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| Protein GI | 77165180 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.301457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGGG AAATTCAGCT GCCTTTCGAG CGGCTATTTG ACACTGCCCC CGATGCCATG
GTGATCTCTG ATCATCAGGG CCGCATCGTC CTCGTTAACG CCATGGCTGA ACGGATGCTT
GGCTATTCGC GAGCAGAACT AATAAGCCAG CCTCTTGAGA TTCTGGTACC AAAGCAACAC
CGCGATGGCC ACGCCCGCCA GCGTCAAAAG TATTATCGTC ACCCCCGCAC TCGCCCCATG
GGCGAAGGTC GTGAACTCTA TGCAGTACGC AAGGACGGCA GCATGTTTTC GGCCGAGATC
AGCCTCAGCC CCATGGAAGT AGATGGCCGC TTATTAATTA CGAGCGCTAT CCGAGATATT
ACGGAACGCA AACAAATACA GAAAACACTA GAACAGCAAA CCCAGGATCT CATGCGCTCT
AATGCCGAAT TAGAACAATT CGCCTATGTG GCTTCCCATG ACCTCCAGGA GCCGCTTCGA
ATGGTCAGCA GTTATGCCCA GTTGCTCGCC CGTCGCTACC GGAATCAATT AGACTCCGAT
GCCGATGAAT TCATCGAGTT CATGGTGGAT GGGGCCACTC GAATGCAGGC ACTCATCAAT
GACTTGCTCG CTTATTCCCG CGCAGGCACC AAAAATAGAA CTTTTGCCAC AACCAATAGT
AACGGGGTAG TCCGGCAGGT TCTGGAAAGC CTCCAATTTG TAGTTAAAGA AACTCAGGCC
TCCCTGACTG TTGATCCTTT GCCCCTGTTA ATAGCAGATG AAGCCCAACT CGCACAACTA
TTCCAGAACC TCATCAGTAA TGCCTTAAAA TTTCGGGGAG AAACGATACC GAGAATCCAT
ATTAGCGCTA AAGAGGAAGA GAATGAAATT ATCTTTTCCA TAGCTGATAA CGGGATTGGG
ATTGAACCTC AATACGCCGA ACGAATTTTT TTACTTTTTC AGCGCCTGCA TAGCAAAAGG
GAATATCCCG GCACAGGTAT TGGCCTCGCC ATTTGCAAGA AGATCGTGGA ATGTCACGGG
GGGCGGATTT GGGTAGAATC CAAGCAGGGC AGGGGGGCTA CGTTTTTCTT CACCTTGCCA
TTCAAACCAG AAAAACCCCT ACCATAA
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| Protein sequence | MTREIQLPFE RLFDTAPDAM VISDHQGRIV LVNAMAERML GYSRAELISQ PLEILVPKQH
RDGHARQRQK YYRHPRTRPM GEGRELYAVR KDGSMFSAEI SLSPMEVDGR LLITSAIRDI
TERKQIQKTL EQQTQDLMRS NAELEQFAYV ASHDLQEPLR MVSSYAQLLA RRYRNQLDSD
ADEFIEFMVD GATRMQALIN DLLAYSRAGT KNRTFATTNS NGVVRQVLES LQFVVKETQA
SLTVDPLPLL IADEAQLAQL FQNLISNALK FRGETIPRIH ISAKEEENEI IFSIADNGIG
IEPQYAERIF LLFQRLHSKR EYPGTGIGLA ICKKIVECHG GRIWVESKQG RGATFFFTLP
FKPEKPLP
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