Gene Noc_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1688 
Symbol 
ID3705601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1889820 
End bp1890395 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content46% 
IMG OID637738169 
Producthypothetical protein 
Protein accessionYP_343690 
Protein GI77165165 
COG category[S] Function unknown 
COG ID[COG5400] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0108944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGA TTTTACGTTT AATATTATTA GCGGTATTTT TAGTAGCTTG CGTGACGGTT 
GGCGCAACTG AAAAGCAGGG CGAGTTAAAG GAAGAGACGT ATTCAGAGGA GGCAGTGCTT 
GCAGCAGCCT CTGAATTTTT TGGTGAGACA ACAAAGGCGC TTGCCCGCGT CATAGAAAAG 
GTATTTAAAG AGCAGGGCCG TCCTAATGGC TATATCACAG GTACAGAGGG CAGTGGCGCC 
ATCGGTGTAG GTCTCCGCTA TGGTGAAGGG GTTTTACATA CAAAAAGCGG GGAAGAAAAA 
AAGGTTTACT GGCAGGGGCC ATCGGTAGGG TTTGATTTTG GTGGTAATTT TTCTAAAGTA 
TTCACCTTAG TTTATCATCT CAAGGATATG GATGCACTTT TTCAACGAAT TCCTGGCGTG 
GATGGAAGCC TTTACTTTAT AGGAGGCGTT AGCGTTAATT ACCAGCAGAC GGATGATCTC 
ATCCTGGCCC CGATTCGTAC GGGCGTGGGC TGGCGGGCTG GTGTTAGCGT AGGTTATGTG 
GACTACACGC ATAAAAAATC TTGGATTCCT TTTTAG
 
Protein sequence
MAKILRLILL AVFLVACVTV GATEKQGELK EETYSEEAVL AAASEFFGET TKALARVIEK 
VFKEQGRPNG YITGTEGSGA IGVGLRYGEG VLHTKSGEEK KVYWQGPSVG FDFGGNFSKV 
FTLVYHLKDM DALFQRIPGV DGSLYFIGGV SVNYQQTDDL ILAPIRTGVG WRAGVSVGYV 
DYTHKKSWIP F