| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1680 |
|---|
| Symbol | |
|---|
| ID | 3705626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1872814 |
|---|
| End bp | 1875636 |
|---|
| Gene Length | 2823 bp |
|---|
| Protein Length | 940 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637738158 |
|---|
| Product | (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase |
|---|
| Protein accession | YP_343682 |
|---|
| Protein GI | 77165157 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3280] Maltooligosyl trehalose synthase |
|---|
| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.810186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCACT GCTATGCGTC CCCCTATCTC AAAGCCCGCT CAGGAAGCCC GCACGGCTAT
GATATCGTCG ATCATAATGC GCTTAATCCA GAAATCGGCG ATGAGGAAAC GTTCTCCTCT
TGGATCTCGG CCCTGCGCCA CCATGGAATG GGGCAAATTC TTGACATCGT GCCTAATCAT
ATGGGGGTGG GTGGCAATGA TAATGTCTGG TGGCTTGATG TGCTGGAACA TGGACCTGCT
TCCGAATATG CTGGTTATTT TGATATTGAT TGGCGTCCCA TAAAAGAAGA ATTGCGGGGC
AAAGTATTAT TGCCCTTGCT TGGAGATCAC TATGGCAAGG TACTTGAAAA AGGTGAACTA
GCGCTCGCCT TTGATCTCGA GCGGGGAGAA TTTAGCCTTT ACTTTTATCA TCACCGGTTT
CCTATTGATC CAAACACTTA TCCAGATATT CTGGGATATC AAGTAGAACG ACTAGCGGAT
CATTTCTCAG AAGAAGAAGT ATCTTTTCTC GAATATCAAA GTCTTATCAC GGCTTTTCAG
CACCTTCCCT CTCGCCATGA CACTAACGCC GAGAAGCGAG TTGAACGTCT CCGAGACTGT
GCCATTTACA AACGACGCTT GGCAGAATCT TGCCGAAAAT ATCCTGCTAT TGGAGCCTTT
GTGCTGGATA CTGTGGCGGC TTTCAATGGC GTGGCCGAGC AACCGGAGAG TTTTGATCGG
CTGCACCATT TATTAGAGCG ACAGGCCTAC CGACTTGCCT ATTGGCGAGT CGCTGCCGAT
GAAATTAACT ATCGCCGCTT TTTTGATATC AATGATTTAG CTGGCCTGCG GATGGAAAAC
CAAGCGGTAT TCGAAACTAC TCATCGGTTT ATTTTAGAGC TGGTCAAAAA AGGGGAAGTA
GACGGGTTGA GGATCGATCA TCCTGATGGA CTTTACGATC CTCTTCGCTA TTATCAGCAC
CTCAATCAGA AAATTACAGA AATAAAAGGT GAAGATGAAG ATAAGGAAAA TAACTTCCCC
CATAAAACTT CTAAGCCTAA TTACTATTTA GTTATTGAGA AAATCTTGGC TAGTTATGAA
TATCTCCCTG AAAACTGGCC TGTTTGTGGC ACTAGTGGTT ATGAATTTTC CTCCCTTAAT
AACGGATTAT TTATATACCC TTCTTCCCAA AAAGAGTTTG AACAACTCTA TAGTCGTTTT
ATCGGTCATT CCTGGGATTT CGATCAATTA CTCTACGAGC GTAAAAAAAT CATCATTCGG
GTCCAGCTTT CCAGTGAACT TACGGTACTT GCCAATAGGC TTAATAGCAT TGCTCAAAAG
GATCGACATA CCCGGGATTT TACTCTAAAT GGACTACGTG AAGCATTAAC AGAAGTGGTT
GCTTGTTTTC CTGTTTATCG TACCTACGTG GCTAGAAATC AGGTTTCGGA AGAAGATAAG
CGTTTTGTCC AATGGGCAGT GGCCCAAGCA AAAAAGAGGA GTCCCGCTGC TGATATCAGT
ATTTTGGACT TTATCCAAGC TATCCTCTTA TTGGAGACTT CATTAAGGAG CGAGCTGTCT
GAGGAAATTA TTTCCTTTGT TATGCGATTC CAGCAATATA CGGGGCCAGT TATGGCTAAG
GCTCTTGAGG ATACCGCATT ATATATCTAT AATTATTTGG TTTCCCTCAA TGATGTCGGT
AGTGATCCGA GAAATTTTGG AGTTTCTCTC TCTTCTTTTC ATCGAGCTAA CCAAGAAAGG
GCACAACGCT GGCCTTATGG TATGGTAACT TCTTCGACCC ATGACAGTAA GCGCAGTGAG
GATGTGCGTG CTCGCCTCAA TGTACTCTCT GAAATACCAG GAGAATGGCG TAAACGCTTA
AGTCGCTGGA CACGCATCAA CCGCTCAAAA GTACGCAGAT TAAATGGATT TCGAGCTCCA
AGCCGGAATG ACGAGTATCT ATTTTACCAG ACAGTGCTTG GTACTTGGCC TCTGCTTGGA
ATGAGTGAGG AGGGATTAGT CGATTTTCAA GGCCGCATTG AAGCCTATAT GCTAAAAGCA
ATTAAAGAGG CTAAAGTTCA TACTTCTTGG ATAAATCCTG ATGTGGAGTA CGAAACAGCG
GTAGTCCATT TTGTACGTAA TGTTTTGGGT AACCTGGAAA AAAATCCTTT TTTACTGGAT
TTCATACCCT TTCAGAAGCG AGTAGCAGGG TTTGGTTTAT TGAATGGATT ATCCCAGCTT
TTATTAAAAT TGACCGTTCC CGGTGTACCA GATATTTATC AGGGTAATGA ACTTTGGGAA
TTCCAGCTTG TTGATCCCGA TAACCGTCAT CCTGTGGACT TTGTGCTAAG GCAACGAATG
CTCCAGCATT TAATGCTGCT GACTCACTCA AAACAGCCTT TGAAATCTCA TACTTACGAA
CTGCTGAGAA CGAAAGAAGA TAGCCTGGTA AAGCTTTATC TGACTTGGAA AACCCTATCT
TTTCGTGCTA AGTTTCCCTT GCTTTTTGAA AAGGGGGACT ATACTTCGCT GTCTGTTCAG
GGAACCAAAG CAGAGCATCT TTGCGCATTC GCAAGAAGAC ATCAGGATAA AATAGTACTT
TCTATCACTC CCCGGTGGTT TGCGCTTTTA GGCAGCAACG GGGATGGGTT GCCACTTGGT
GAGTCGCTGT GGAAAGGGAC TTGGGTGGAA ATCCCGGAAG TCAATGGGCA CAAAAAATTC
ACTAATGTAT TGACTGATGA AATAGTAACG ATTGTGCAGG ACAAGGGGAA AAACTATATT
CCCGCAAATA AGCTATTTGA AAGTTTTTCC GTGGCACTGC TTTTTAGCCT TAGATCATTT
TAG
|
|---|
| Protein sequence | MSHCYASPYL KARSGSPHGY DIVDHNALNP EIGDEETFSS WISALRHHGM GQILDIVPNH
MGVGGNDNVW WLDVLEHGPA SEYAGYFDID WRPIKEELRG KVLLPLLGDH YGKVLEKGEL
ALAFDLERGE FSLYFYHHRF PIDPNTYPDI LGYQVERLAD HFSEEEVSFL EYQSLITAFQ
HLPSRHDTNA EKRVERLRDC AIYKRRLAES CRKYPAIGAF VLDTVAAFNG VAEQPESFDR
LHHLLERQAY RLAYWRVAAD EINYRRFFDI NDLAGLRMEN QAVFETTHRF ILELVKKGEV
DGLRIDHPDG LYDPLRYYQH LNQKITEIKG EDEDKENNFP HKTSKPNYYL VIEKILASYE
YLPENWPVCG TSGYEFSSLN NGLFIYPSSQ KEFEQLYSRF IGHSWDFDQL LYERKKIIIR
VQLSSELTVL ANRLNSIAQK DRHTRDFTLN GLREALTEVV ACFPVYRTYV ARNQVSEEDK
RFVQWAVAQA KKRSPAADIS ILDFIQAILL LETSLRSELS EEIISFVMRF QQYTGPVMAK
ALEDTALYIY NYLVSLNDVG SDPRNFGVSL SSFHRANQER AQRWPYGMVT SSTHDSKRSE
DVRARLNVLS EIPGEWRKRL SRWTRINRSK VRRLNGFRAP SRNDEYLFYQ TVLGTWPLLG
MSEEGLVDFQ GRIEAYMLKA IKEAKVHTSW INPDVEYETA VVHFVRNVLG NLEKNPFLLD
FIPFQKRVAG FGLLNGLSQL LLKLTVPGVP DIYQGNELWE FQLVDPDNRH PVDFVLRQRM
LQHLMLLTHS KQPLKSHTYE LLRTKEDSLV KLYLTWKTLS FRAKFPLLFE KGDYTSLSVQ
GTKAEHLCAF ARRHQDKIVL SITPRWFALL GSNGDGLPLG ESLWKGTWVE IPEVNGHKKF
TNVLTDEIVT IVQDKGKNYI PANKLFESFS VALLFSLRSF
|
|---|
| |