| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1677 |
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| Symbol | |
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| ID | 3705622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1870184 |
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| End bp | 1871515 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637738154 |
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| Product | trigger factor |
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| Protein accession | YP_343679 |
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| Protein GI | 77165154 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.294765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGTCA CGGTAGAAGC GACCGGCGAA CTAGAACGGC GCTTGACCAT CACATTGCCG
GGGAGTGATT TTGAGAGTAA GGTGCAAGAA CGTCTACGTT CCATGGTTCC AAGGATAAAA
ATGGATGGTT TCCGTCCTGG CAAAGTTCCT TATAAGGTGG TAGAACGCCG GTATGGTTCA
GCTGTACGCC AAGAAGTATC GGATGAATTT GTTCGGGATA GTTTTCGTGA CGCAATCAAA
CAGGAATCTT TGCGGCCTGC TGGAATGCCG CAGATTGAAC CACCTCAGCT AGAAGCAGGC
GAATCTTTTG CCTATACCGT AACCTTCGAA GTATTACCAG AGATTGAGTC TGTTAAGCTT
GAGGGAATTA AGATCAAACA GCCACGGGCT GAAGTTACCG ATAAGGATAT CGAGGGGGTT
TTAAAGAAGC TACAGGAACA GCATATAGAA TGGGAACCAA TGGAACGTCC AGCTCAAGAA
GCGGATGGGG TAACCATTAC TTATCATGGG AGTATTGAAG GGAAACCTTT TCCAGGCGGA
AGCAAAGAGA ATTTTTTTGT TATTTTGGGT AAAGGAACAA CTCTCAAGGA ATTTGAAGAA
CACTTAATAG GCGTTAACAA GGGTCAAGAA CTTACTTTTG AGATCACTTT TCCTGAACAC
TATGGCAACC AGGAATTAGC AGGTAAAAAA GCGAGTTTTG CAGTGAAAGT TATTTCCGTG
ACAGCGCCTC GGTTACCCGA GATTAATGAG GATTTTGCAG AGAAGCTCGG TGTTAAGGAG
GGGGGAGTAG CGGCCCTACG CCAGGAAATT AAGGCTTCAA TGACGCGAAA CTTGGAACAA
GCCGTTCGTG ATCGCGTAAG AGAGCAAATT ATGGATGGCC TATTAGTTGC TAATCCTACC
ACTTTGCCAA TATCCTTGGT GAAGGAGGAA ACAAGCATTT TGCTTGAACA AGCTAAAAAT
AATTTAGCTA AACAGGGGGT TAACCCGCAA GAAATTTCTT TGGATGAATC GCCATTCGTG
GAACAGGCGC GTAGACGGGT GGCTCTAAGA TTAATTTTTA GTACTATCTT AGAAAAGCAA
GAAATTAAGG CGGATCAGGA TAAAATAAAG CAAAGAGTCA CAGAGCTTGC AGCAAGTTAT
GAGGACCCAG AGGAGTTTTC TCGATGGATA TTTAGTGATC GAGAACGCCT TTCAGAGATT
GAAAACGCCG TTATGGAAAC TCAGATCATA GATTGGGTAC TGGATCAGGT TGAAGTTTTA
GATAAATCAA TGAGTTTCGA AGAGGTAGTA AATCCTCAGA TTTCCTCGGC CAAGGAGAAG
GTTCAGGATT AA
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| Protein sequence | MQVTVEATGE LERRLTITLP GSDFESKVQE RLRSMVPRIK MDGFRPGKVP YKVVERRYGS
AVRQEVSDEF VRDSFRDAIK QESLRPAGMP QIEPPQLEAG ESFAYTVTFE VLPEIESVKL
EGIKIKQPRA EVTDKDIEGV LKKLQEQHIE WEPMERPAQE ADGVTITYHG SIEGKPFPGG
SKENFFVILG KGTTLKEFEE HLIGVNKGQE LTFEITFPEH YGNQELAGKK ASFAVKVISV
TAPRLPEINE DFAEKLGVKE GGVAALRQEI KASMTRNLEQ AVRDRVREQI MDGLLVANPT
TLPISLVKEE TSILLEQAKN NLAKQGVNPQ EISLDESPFV EQARRRVALR LIFSTILEKQ
EIKADQDKIK QRVTELAASY EDPEEFSRWI FSDRERLSEI ENAVMETQII DWVLDQVEVL
DKSMSFEEVV NPQISSAKEK VQD
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