| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1676 |
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| Symbol | |
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| ID | 3705621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1869536 |
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| End bp | 1870147 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637738153 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_343678 |
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| Protein GI | 77165153 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.706885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGATA GCCTCAATAC GTTAGTTCCC ATGGTCGTGG AGCAAACAGC TCGCGGGGAA
CGCGCTTATG ATATCTATTC CCGGCTACTT AAGGAGCGAG TAGTATTCTT GGTGGGGCCA
GTTGAAGATC ATATGGCGAA TTTGGTTGTT GCCCAATTGC TTTTTCTAGA ATCTGAGAAT
CCTGACAAAG ATATTCATCT TTATATTAAT TCTCCAGGGG GATCGGTAAC CGCTGGACTA
TCCATTTATG ATACGATGCA ATTTATTAAA CCTGATGTAA GCACTCTTTG CGTTGGGCAA
GCGGCTAGTA TGGGAGCAGT GTTGTTAGCA GGGGGAGCGG GGGGAAAACG CCATTGCTTG
CCCCATTCAC GGCTTCTCAT TCACCAACCT TTAGGTGGAT TCCAAGGGCA AGCCACGGAC
ATTGACATTC ATGCGCGGGA GATTCTGCTG GTTCGGGAGC GTTTAAATCA TATTCTTGCT
AAGCATACCG GTCAGCCGAT TGAAAAAATT CAACATGATA CCGATCGCGA CTATTTTATG
AGTGCAACTG AATCATTGGC TTATGGGTTA GTTGACTCAG TGCTTAAGCA ACGTGCTGAA
ATATCGCTTT AG
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| Protein sequence | MIDSLNTLVP MVVEQTARGE RAYDIYSRLL KERVVFLVGP VEDHMANLVV AQLLFLESEN
PDKDIHLYIN SPGGSVTAGL SIYDTMQFIK PDVSTLCVGQ AASMGAVLLA GGAGGKRHCL
PHSRLLIHQP LGGFQGQATD IDIHAREILL VRERLNHILA KHTGQPIEKI QHDTDRDYFM
SATESLAYGL VDSVLKQRAE ISL
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