Gene Noc_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1665 
Symbol 
ID3705645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1858417 
End bp1859160 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content48% 
IMG OID637738142 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_343667 
Protein GI77165142 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.139434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTGG AAGGTAAGGT CGCCTTAATT ACCGGAGCGA GTAGGGGAAT CGGTCGAGCC 
ATTGCCGAGG GGCTTGCTCT TCAAGGAGCA ACAGTGGTTG GAACGGCCAC CTCAAAGGAA
GGTACGGAAG GAATTAGTGC TTTCCTTGCT GAGCGGGAAT GGCCAGGCAT GGGGATAATA
TTGGATGTCT CTGATCCTAC TTCAATCGAT TCAGCGCTTG CAGTTATCTC AGATCAGCTC
GGTGTTCCCG CTATTTTAGT AAATAATGCG GGTATTACCC GTGATAATCT GCTAATGCGT
ATGAAGGATG AAGAATGGGA AACTATTCTT AACATCAATC TAACGGCTAT TTATCGTCTC
TCAAAAGGAT GTCTTCGAGG TATGATGAAA ACCCGTTGGG GACGCATTAT TAACATTACT
TCGGTGACCG GTGTAATGGG AAATGCCGGA CAGACCAATT ATGCTGCCGC AAAAGCGGGC
ATGATAGGCT TTACCAAAGC GCTTGCACGG GAAGTAGGAA CCCGAGGGGT TACCGTTAAT
GCTGTGGCTC CAGGCTTTAT AGATACTGAT ATGACCCGCG ATCTTGCGGA TACTCGGCGG
GAAATGTTGC TAGCACAAAT TCCCTTAAAC AGGCTAGGCA AAGCTCAGGA AGTTGCTGCT
GCGGTAGCTT TTCTTGCAAG TTTAGAGGCG AGTTATATTA CGGGAGAGAC TTTACATGTT
AATGGCGGAC TCTATATGGC TTAG
 
Protein sequence
MRLEGKVALI TGASRGIGRA IAEGLALQGA TVVGTATSKE GTEGISAFLA EREWPGMGII 
LDVSDPTSID SALAVISDQL GVPAILVNNA GITRDNLLMR MKDEEWETIL NINLTAIYRL
SKGCLRGMMK TRWGRIINIT SVTGVMGNAG QTNYAAAKAG MIGFTKALAR EVGTRGVTVN
AVAPGFIDTD MTRDLADTRR EMLLAQIPLN RLGKAQEVAA AVAFLASLEA SYITGETLHV
NGGLYMA