Gene Noc_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1660 
Symbol 
ID3705640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1854049 
End bp1854669 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content45% 
IMG OID637738137 
Productthymidylate kinase 
Protein accessionYP_343662 
Protein GI77165137 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0638751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGAGG GTATTGAGGG AGCCGGGAAA AGTACTCAGC TTAAATTTAT TCAGCAGTTA 
CTTCAGAGCA CAGAGAAAAA TGTTATTGTT ACTCGTGAAC CTGGTGGTAC TTTCTTGGGA 
GAACAGATTC GGGAATTATT ATTGTCGCCG AGACTAGAAG GTATGTCTGC CGATACGGAG 
CTCCTATTGA TGTTTGCGGC CCGTGTAGAA CACGTGCAAC AAGTGATTTT CCCTGCTCTA 
GCAGCGGGAA AGTGGGTTCT CTGTGATCGT TTTACAAGTG CCAGCTATGC TTACCAAGGG 
GGAGGGCGGG AGCTTCCTTT GTCGCGTATT GCAAAACTTG AGAGCTGGGC TCTTAATTGT 
TTACGCCCGG ATTTAATCCT TTTATTCGAT GTTCCCGTGA GGCTTGGGTT GCAAAGGGCC 
ACGACTCGCT GCCAGCAACT AGATCGCTTT GAACAGGAAA AAATTGATTT TTTTGATCGT 
GCCCGTACGA TCTATCTTTC CTTAGCTAAA AAATATCCGG ATCAATATCG CCTAATCGAT 
TCTTCGCTAC CTTTAACAAG GGTGCAGGAA GCTATTCAGA AAGTAATTAT GGCATTCTTG 
GAAGAAAATC GTGATGCCTG A
 
Protein sequence
MLEGIEGAGK STQLKFIQQL LQSTEKNVIV TREPGGTFLG EQIRELLLSP RLEGMSADTE 
LLLMFAARVE HVQQVIFPAL AAGKWVLCDR FTSASYAYQG GGRELPLSRI AKLESWALNC 
LRPDLILLFD VPVRLGLQRA TTRCQQLDRF EQEKIDFFDR ARTIYLSLAK KYPDQYRLID 
SSLPLTRVQE AIQKVIMAFL EENRDA