| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1657 |
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| Symbol | |
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| ID | 3705637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1851847 |
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| End bp | 1852632 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637738134 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_343659 |
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| Protein GI | 77165134 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000576641 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGGTCG ATTCTCATTG CCATTTGAAT TTGCTTGATT TGACTCCGTT TGATGGTTCA
GTACATTCTG TGATGGAGGA ATCTCGAAAA GCAGGCATTA GCCACATGCT ATGCGTGTCA
GTAGACTTAG AAACTTTTCC TGATATTCGT GCATTAGCGC AGGAATATGC TGAGATATCG
GTTTCCGTCG GAATACACCC TAATGCTAGT AAAGATGTTA AGATTACTGT AGAGCAATTA
TTGGAATTAG CGGCTACTCC AAAGGTGGTG GCAATTGGAG AAACTGGCTT GGACTATTTT
CGTAGCGAAG GGGACCTGGC ATGGCAGCGT GAACGGTTGC GGATTCATAT CGCAGCAGCA
AAAGAATGCG GAAAACCACT CATTATACAT ACTAGACAAG CTAAGAGAGA TACTGTGCGT
ATCCTGAAAG AGGAGGGCGC AGATGAAGTA GGAGGGGTCC TTCACTGTTT TACAGAAGAT
TGGGAAACGG CAAAAGAAGG TTTAGATTTG GGATTTTACA TTTCCTTTTC TGGAATTATT
ACCTTTCGTA ATGCAGGAGT CTTGCGGAAA GTAGCTACCC AAATCCCATC TAATCGTTTA
CTAATAGAGA CCGATTCTCC TTACTTAGCA CCAGTACCCC ATCGGGGTAC GCCCAATCGA
CCCGCTTATG TTCGCTATGT GGCTCAATGT ATGGCAGATC TGCGGAAAAT TTCCTTAGCG
GATCTTGAAG ATTTAACAAC AGAAAATTTC TTTTCCTTAT TCTCTGAGGC AGCATTGCCT
GCTTGA
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| Protein sequence | MLVDSHCHLN LLDLTPFDGS VHSVMEESRK AGISHMLCVS VDLETFPDIR ALAQEYAEIS
VSVGIHPNAS KDVKITVEQL LELAATPKVV AIGETGLDYF RSEGDLAWQR ERLRIHIAAA
KECGKPLIIH TRQAKRDTVR ILKEEGADEV GGVLHCFTED WETAKEGLDL GFYISFSGII
TFRNAGVLRK VATQIPSNRL LIETDSPYLA PVPHRGTPNR PAYVRYVAQC MADLRKISLA
DLEDLTTENF FSLFSEAALP A
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