Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1654 |
Symbol | |
ID | 3705633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1848575 |
End bp | 1849243 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637738130 |
Product | hypothetical protein |
Protein accession | YP_343656 |
Protein GI | 77165131 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000318402 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTACA ATAATCAAGT AGTTTTACAG AAAACCTCTT CGATATCCAC AACCAATAAA TTGGTGCGTA ATACTTATAC CCTTCTTGCT GCAACTCTGC TTTTTAGCGC TGTCACTGCA GGAGTTGCCA TGGCGGTTAA TGCCCCCCCT GTGCATTGGG TAATTACATT GATAGGCTAT TTCGGTTTAT TATTTCTGAC TAATGCGCTA CGCAATAGCG CATGGGGATT AGCGGCTATC TTTGCTCTTA CCGGATTTAT GGGCTATACA TTAGGGCCCA TTCTTAATTT TTATCTGGGT CTACCTAATG GTCATGAAAC AGTGATGCTC GCACTAGGGG GTACTGGCGT TATTTTCTTC GGTCTTTCAG GCTATGCCCT AACAACCCGT AAAGACTTCA GCTTTATTGG CGGTTTTCTG ATGGTAGGTA TTTTAGTGGC CTTCCTTGCG GGACTAGCTG CTATGTTATT CCAAATTCCC GCTTTATCTT TGGCCGTTTC TGCTATGTTT ATCCTGTTAA TGTCAGGCTT TATTTTGTTT CAGACCAGCC TACTTGTTAA TGGGGGCGAA ACTAACTATA TCATGGCCGC TGTCGGTCTG TATGTGGCGA TTTATAACTT ATTCCTAAGT CTGTTACATC TCTTAGGAAT TTTTGGTGGT GATGAGTAG
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Protein sequence | MRYNNQVVLQ KTSSISTTNK LVRNTYTLLA ATLLFSAVTA GVAMAVNAPP VHWVITLIGY FGLLFLTNAL RNSAWGLAAI FALTGFMGYT LGPILNFYLG LPNGHETVML ALGGTGVIFF GLSGYALTTR KDFSFIGGFL MVGILVAFLA GLAAMLFQIP ALSLAVSAMF ILLMSGFILF QTSLLVNGGE TNYIMAAVGL YVAIYNLFLS LLHLLGIFGG DE
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