Gene Noc_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1654 
Symbol 
ID3705633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1848575 
End bp1849243 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID637738130 
Producthypothetical protein 
Protein accessionYP_343656 
Protein GI77165131 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000318402 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTACA ATAATCAAGT AGTTTTACAG AAAACCTCTT CGATATCCAC AACCAATAAA 
TTGGTGCGTA ATACTTATAC CCTTCTTGCT GCAACTCTGC TTTTTAGCGC TGTCACTGCA
GGAGTTGCCA TGGCGGTTAA TGCCCCCCCT GTGCATTGGG TAATTACATT GATAGGCTAT
TTCGGTTTAT TATTTCTGAC TAATGCGCTA CGCAATAGCG CATGGGGATT AGCGGCTATC
TTTGCTCTTA CCGGATTTAT GGGCTATACA TTAGGGCCCA TTCTTAATTT TTATCTGGGT
CTACCTAATG GTCATGAAAC AGTGATGCTC GCACTAGGGG GTACTGGCGT TATTTTCTTC
GGTCTTTCAG GCTATGCCCT AACAACCCGT AAAGACTTCA GCTTTATTGG CGGTTTTCTG
ATGGTAGGTA TTTTAGTGGC CTTCCTTGCG GGACTAGCTG CTATGTTATT CCAAATTCCC
GCTTTATCTT TGGCCGTTTC TGCTATGTTT ATCCTGTTAA TGTCAGGCTT TATTTTGTTT
CAGACCAGCC TACTTGTTAA TGGGGGCGAA ACTAACTATA TCATGGCCGC TGTCGGTCTG
TATGTGGCGA TTTATAACTT ATTCCTAAGT CTGTTACATC TCTTAGGAAT TTTTGGTGGT
GATGAGTAG
 
Protein sequence
MRYNNQVVLQ KTSSISTTNK LVRNTYTLLA ATLLFSAVTA GVAMAVNAPP VHWVITLIGY 
FGLLFLTNAL RNSAWGLAAI FALTGFMGYT LGPILNFYLG LPNGHETVML ALGGTGVIFF
GLSGYALTTR KDFSFIGGFL MVGILVAFLA GLAAMLFQIP ALSLAVSAMF ILLMSGFILF
QTSLLVNGGE TNYIMAAVGL YVAIYNLFLS LLHLLGIFGG DE